PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028099912.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 200aa MW: 22667.8 Da PI: 6.0792 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.4 | 2.5e-18 | 122 | 174 | 2 | 54 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 rk+ +++k+q +Lee+F+ +++++ +++ LAk+lgL rqV vWFqNrRa+ XP_028099912.1 122 RKKLRLSKDQSMILEECFKVHNTLNLKQKLALAKRLGLRPRQVEVWFQNRRAR 174 788899**********************************************8 PP | |||||||
2 | HD-ZIP_I/II | 78.6 | 9.9e-26 | 122 | 176 | 1 | 55 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtk 55 +kk+rlsk+q+ +LEe+F+ +++L+ ++K +la++Lgl+prqv+vWFqnrRAR XP_028099912.1 122 RKKLRLSKDQSMILEECFKVHNTLNLKQKLALAKRLGLRPRQVEVWFQNRRARLE 176 69***************************************************75 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MASEEVRKPP SIPPYPEMLI PLLQIPPKIS QKKNFPSFDR NSETCRVETR SLLKGIDVNQ 60 VPSTIDCEEE AGVSSPNSTI SSISGKRSER EEPNGEDLDL DLDLERASSR GISDEEDGDT 120 SRKKLRLSKD QSMILEECFK VHNTLNLKQK LALAKRLGLR PRQVEVWFQN RRARLELCLF 180 FNGVFGILSR VKVQELQSGE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 121 | 127 | SRKKLRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16780.1 | 7e-44 | HD-ZIP family protein |