PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028099683.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 955aa MW: 106251 Da PI: 6.7802

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028099683.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.3	3.7e-29	631	681	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++ XP_028099683.1 631 EKTISLQVLRQYFSGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV 681 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 955 aa Download sequence
MEDGAFIPNI MLETLSDNTL NFELLDELLY DGYWLETAEE SNLWQPVLST SSPLNFSSYC 60 PPNSETKMDH LNPNPHKKSC EEGTERSYFG DNLPLVYPQM DNLIGSQTQN MEVILSAASP 120 GQSENFMVDG TEMSTRLWIA PSANPRPIFS VEKRLMQAIE YLRESTRDRD VLIQIWVPIK 180 RGGKHVLTTN NQPFFLSPNC KSLADYRDIS RNYQFAAEEN SKDFFGLPGR VFLNKLPEWT 240 PDVRFFRREE YPRVNFAQQY NVSGSIALPV FERSRGTCLG VLEIVTTAQK VNYRPELENV 300 CKALEAFDLR SSEILSPPTI KACDDSYQSA LKEIQEVLKS VCDVHGLPLA QTWAPCIQQG 360 KAGCRHSDKN YARCVSTVDS ACYVPNLQVL GFHEACSEHH LLRGEGIAGG AFMTNQPCFA 420 TDITAFSKTE YPLSHHARVF GLRASVAIHL RSVYTGSADF VLEFFLPLDC HDAEEQRHML 480 SSLSSVVQHV CRSLRVVTDQ ELAEETIVPT GGGLDEENTR ELVSSLSKEP SREEESSWIA 540 HMMEAQRKGK AVAVSLGFQK EEPEELFKVT THSDNDGMEF NFGEAFLGHK QIHQDTGSKG 600 SAKSSGDFSS VGRRRVSGGR KPVEKRQTKT EKTISLQVLR QYFSGSLKDA AKSIGVCPTT 660 LKRICRQHGI TRWPSRKIKK VGHSLRKLQN VIDSVQGVKG AIQLSSFYTN FPELSSPNLP 720 STTSPLSTSK MNDQLKQHDT QPEASLFSPV TTTSKSPSSS CSQGSCASFC CSTEAKKLPP 780 VTVLHASGGG DAVLVEQPSG VLKRACSDAE LHKSGQEETK LIGRSKSHKC FSELPMLDAV 840 QTSLPKSGSQ VSRRGSSFKI KATFGEEKIR FSMQRNWTFR YLLQEVARRF GMEDSSRIDI 900 KYLDDDSEWV LLTCDADLEE CIDVHRSSRS HTIKLTVHQA LNLSLGSSIG SSGAP

Sequence ? help Back to Top

Protein Sequence Length: 955 aa Download sequence

MEDGAFIPNI MLETLSDNTL NFELLDELLY DGYWLETAEE SNLWQPVLST SSPLNFSSYC  60
PPNSETKMDH LNPNPHKKSC EEGTERSYFG DNLPLVYPQM DNLIGSQTQN MEVILSAASP  120
GQSENFMVDG TEMSTRLWIA PSANPRPIFS VEKRLMQAIE YLRESTRDRD VLIQIWVPIK  180
RGGKHVLTTN NQPFFLSPNC KSLADYRDIS RNYQFAAEEN SKDFFGLPGR VFLNKLPEWT  240
PDVRFFRREE YPRVNFAQQY NVSGSIALPV FERSRGTCLG VLEIVTTAQK VNYRPELENV  300
CKALEAFDLR SSEILSPPTI KACDDSYQSA LKEIQEVLKS VCDVHGLPLA QTWAPCIQQG  360
KAGCRHSDKN YARCVSTVDS ACYVPNLQVL GFHEACSEHH LLRGEGIAGG AFMTNQPCFA  420
TDITAFSKTE YPLSHHARVF GLRASVAIHL RSVYTGSADF VLEFFLPLDC HDAEEQRHML  480
SSLSSVVQHV CRSLRVVTDQ ELAEETIVPT GGGLDEENTR ELVSSLSKEP SREEESSWIA  540
HMMEAQRKGK AVAVSLGFQK EEPEELFKVT THSDNDGMEF NFGEAFLGHK QIHQDTGSKG  600
SAKSSGDFSS VGRRRVSGGR KPVEKRQTKT EKTISLQVLR QYFSGSLKDA AKSIGVCPTT  660
LKRICRQHGI TRWPSRKIKK VGHSLRKLQN VIDSVQGVKG AIQLSSFYTN FPELSSPNLP  720
STTSPLSTSK MNDQLKQHDT QPEASLFSPV TTTSKSPSSS CSQGSCASFC CSTEAKKLPP  780
VTVLHASGGG DAVLVEQPSG VLKRACSDAE LHKSGQEETK LIGRSKSHKC FSELPMLDAV  840
QTSLPKSGSQ VSRRGSSFKI KATFGEEKIR FSMQRNWTFR YLLQEVARRF GMEDSSRIDI  900
KYLDDDSEWV LLTCDADLEE CIDVHRSSRS HTIKLTVHQA LNLSLGSSIG SSGAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein