PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028099161.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 674aa MW: 74877.8 Da PI: 6.6391

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028099161.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.6	0.00051	498	535	13	55
HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +i ++++eLr+l+P+ K+s + L ++++++ Lq XP_028099161.1 498 RIQIEERIAELRKLIPNG-----VKMSIDSLLAQTIKHMLFLQ 535 889*************96.....69999999999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 674 aa Download sequence
MLRKKSDSQV HKALQRLCRN YGWSYGVFWR FDPTNSLLLT MEDAYYEEHV GVIIDDMLLQ 60 VHVLGNGIVG QSAFTNTHRW MFSDAVVSID NHDMIQDNSE IHHQFSCGIE TVVLISVEPR 120 GVVQFGSTQK IPERMEFVDQ TKRLFREIEN GDMVFLPDNI RSSSNSEIYG MSGGLFASLI 180 SSGNSNPRNL KPIDDANSKN YVGTTSSSAD LPWLSPFTSD HGRTHSSHLQ NQLQMVTTEA 240 PLVQSTTYCS AAPTPCISTW SSGQSTLTSF EQQLLSETRL PSSQNVSPFN NLANSVQSSV 300 TNKFNSGGNK KLFNDFSVEN DLFDGFGVDF ECGQAEDFLN EILMPVVSAG HLDFITDTSE 360 RVSEQCVGSM VGPQERLFSK LGLEQFSSSN SMASSSFGDE LSSTSKRKMG SCSVSDNQVH 420 LTSLPCFSGN MNSLCPVYNL EPKKAVNPKS LVGSRIGDSY SITGGSSLVV SKPKKSKESA 480 KVGRKRARPG SRPKPKDRIQ IEERIAELRK LIPNGVKMSI DSLLAQTIKH MLFLQSVTKH 540 AEKLQQADER KETELAQTMV DPVDVKDLSP SGQKLIQMLC EENGFFLEII DIIQGFGLTI 600 LKGVMEIREN KIWACFIVEA EANRHVMKQE IYMSLHKLLY QKATSVINVL NGGTTLFNNY 660 HQHLLPFATS HRLG

Sequence ? help Back to Top

Protein Sequence Length: 674 aa Download sequence

MLRKKSDSQV HKALQRLCRN YGWSYGVFWR FDPTNSLLLT MEDAYYEEHV GVIIDDMLLQ  60
VHVLGNGIVG QSAFTNTHRW MFSDAVVSID NHDMIQDNSE IHHQFSCGIE TVVLISVEPR  120
GVVQFGSTQK IPERMEFVDQ TKRLFREIEN GDMVFLPDNI RSSSNSEIYG MSGGLFASLI  180
SSGNSNPRNL KPIDDANSKN YVGTTSSSAD LPWLSPFTSD HGRTHSSHLQ NQLQMVTTEA  240
PLVQSTTYCS AAPTPCISTW SSGQSTLTSF EQQLLSETRL PSSQNVSPFN NLANSVQSSV  300
TNKFNSGGNK KLFNDFSVEN DLFDGFGVDF ECGQAEDFLN EILMPVVSAG HLDFITDTSE  360
RVSEQCVGSM VGPQERLFSK LGLEQFSSSN SMASSSFGDE LSSTSKRKMG SCSVSDNQVH  420
LTSLPCFSGN MNSLCPVYNL EPKKAVNPKS LVGSRIGDSY SITGGSSLVV SKPKKSKESA  480
KVGRKRARPG SRPKPKDRIQ IEERIAELRK LIPNGVKMSI DSLLAQTIKH MLFLQSVTKH  540
AEKLQQADER KETELAQTMV DPVDVKDLSP SGQKLIQMLC EENGFFLEII DIIQGFGLTI  600
LKGVMEIREN KIWACFIVEA EANRHVMKQE IYMSLHKLLY QKATSVINVL NGGTTLFNNY  660
HQHLLPFATS HRLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	9e-40	bHLH family protein