PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028098955.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | NF-YC | ||||||||
Protein Properties | Length: 255aa MW: 28599.3 Da PI: 6.4179 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 178.2 | 7.9e-56 | 74 | 177 | 1 | 101 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql+sfw++q iek+tdfknh+lPlarikki+kadedv+misaeaP+++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdfl XP_028098955.1 74 QLQSFWANQyqeIEKVTDFKNHNLPLARIKKIMKADEDVRMISAEAPIVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFL 168 89******99999********************************************************************************** PP NF-YC 93 vdivprdel 101 vdivpr++l XP_028098955.1 169 VDIVPREDL 177 ******987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MDQQGHGQPQ GAQLHYGTSQ FEPNQVGGTP NRGPVVTSVG PTQSPSQPGG AQLAQHQLAY 60 QHIHQQQQQL LQQQLQSFWA NQYQEIEKVT DFKNHNLPLA RIKKIMKADE DVRMISAEAP 120 IVFARACEMF ILELTLRSWN HTEENKRRTL QKNDIAAAIT RTDIFDFLVD IVPREDLKDE 180 ALASIPRGTM PVGGPADAYP YYYMPPQHSP QAGTPGMIMG KPVLDPVMYA QQPHPYMAPQ 240 MWPQAPQQPQ SPTDS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 147 | 153 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08970.3 | 3e-76 | NF-YC family protein |