PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028098403.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 632aa MW: 72635.1 Da PI: 6.8124

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028098403.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	48.3	2e-15	507	550	5	48
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 isledl++ F +++kdAA +Lgv+ +++Kr CR+y+I W Rk XP_028098403.1 507 ISLEDLQQRFGMKLKDAAESLGVSRSTVKRVCREYNITWWSPRK 550 89**************************************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 632 aa Download sequence
MENEHFLRTE NRVVDFMIRD FPPNFKSYVK NKQLLCQQGI WERGWVFWRG EEDPRERPPP 60 PPPFSEIING TLNAPPIPQF MEKIKSHFKW VVCLRGGTQF LIQFWKVIEI EGKRLLTTRH 120 QPFGFDHINE GLCGYRLISL DYEFDVDGVS DEHLGLLGRV FCHQLLESTP NVQYYSRKEY 180 PQRDRAISCN IKLSLAVPLF EPSTRCCIGV IEMVSTTEIT NRNLKIFRYR QMLSGLQVEG 240 LRISNCEHSY DRKDKDETLE EIKKMEDVMR SIHHLPLAQT WASCRLCNAV FIIHNGVYNL 300 DDFLDACDLH HLRKGQGVVG RAISSQNLVF CKDVTQFSIT EYPLAHYARK LGLTGSFAIC 360 LWSNYIEDNV YVLEFFLPPN YCEGGDPRIA LVPLLTTMKR HCKSFKVASG EELGEELSIE 420 VLDFSEDGKL YSYQIPETAR SPNRMDKGEK MVFLDLSDQQ LPKVDVIDTG NNVVTNPEET 480 NIVVTSVQQN CIVNLSQRLQ RKAGIPISLE DLQQRFGMKL KDAAESLGVS RSTVKRVCRE 540 YNITWWSPRK RSKDNQSLSN KLVQGVVQEQ ILESSQPQIS DPPHMQDMAI ASRTKPHFTA 600 TQDTSIVTIK AKYGDDFIKF QLPVSSGMLE FQ

Sequence ? help Back to Top

Protein Sequence Length: 632 aa Download sequence

MENEHFLRTE NRVVDFMIRD FPPNFKSYVK NKQLLCQQGI WERGWVFWRG EEDPRERPPP  60
PPPFSEIING TLNAPPIPQF MEKIKSHFKW VVCLRGGTQF LIQFWKVIEI EGKRLLTTRH  120
QPFGFDHINE GLCGYRLISL DYEFDVDGVS DEHLGLLGRV FCHQLLESTP NVQYYSRKEY  180
PQRDRAISCN IKLSLAVPLF EPSTRCCIGV IEMVSTTEIT NRNLKIFRYR QMLSGLQVEG  240
LRISNCEHSY DRKDKDETLE EIKKMEDVMR SIHHLPLAQT WASCRLCNAV FIIHNGVYNL  300
DDFLDACDLH HLRKGQGVVG RAISSQNLVF CKDVTQFSIT EYPLAHYARK LGLTGSFAIC  360
LWSNYIEDNV YVLEFFLPPN YCEGGDPRIA LVPLLTTMKR HCKSFKVASG EELGEELSIE  420
VLDFSEDGKL YSYQIPETAR SPNRMDKGEK MVFLDLSDQQ LPKVDVIDTG NNVVTNPEET  480
NIVVTSVQQN CIVNLSQRLQ RKAGIPISLE DLQQRFGMKL KDAAESLGVS RSTVKRVCRE  540
YNITWWSPRK RSKDNQSLSN KLVQGVVQEQ ILESSQPQIS DPPHMQDMAI ASRTKPHFTA  600
TQDTSIVTIK AKYGDDFIKF QLPVSSGMLE FQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-92	Nin-like family protein