PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028098216.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

SRS

Protein Properties

Length: 366aa MW: 39872.9 Da PI: 7.882

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028098216.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	230.6	2.8e-71	135	292	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa........aeaaskrkrelkskkqsalsst 89 g++sCqdCGnqakkdC+h+RCRtCCksrgf+C+thvkstWvpaakrrerqqqla++++++ +++ +++++kr+re+++ + s+l +t XP_028098216.1 135 GGSISCQDCGNQAKKDCEHMRCRTCCKSRGFHCHTHVKSTWVPAAKRRERQQQLATLQQQQHEQSqsqqqellHRDHPKRHRENMNPSGSSLVCT 229 5789*************************************************99988877767889999999999*999999999999 PP DUF702 90 klssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +l+s+ s le+ ++P+ev+s+avfrcvrvss+dd+e+++aYqtav+igGhvf+GiLyd+Gle+ XP_028098216.1 230 RLTSNAS--GLEMGNFPPEVNSPAVFRCVRVSSIDDAEDQYAYQTAVNIGGHVFRGILYDHGLET 292 9988765..588899*********************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MAGFFSLGSG GGGGRGTRNN HQQSSNNTNP PPPQPNEINP ESWFLHRSED VTYKGFELWQ 60 QPPQHHHHQH HHHPHPEHNI QQQQQQQRHS NPLQDLYSSA GGLAVGPSRS SINISNESSR 120 SAFVMMRSSG SGSGGGSISC QDCGNQAKKD CEHMRCRTCC KSRGFHCHTH VKSTWVPAAK 180 RRERQQQLAT LQQQQHEQSQ SQQQELLHRD HPKRHRENMN PSGSSLVCTR LTSNASGLEM 240 GNFPPEVNSP AVFRCVRVSS IDDAEDQYAY QTAVNIGGHV FRGILYDHGL ETHYMAGESS 300 SGGTPSGLNL ITAAMATATS AVTTAAGATA AVVDSPAAGA FLDPSLYPAP LNTFMSGTQF 360 FPLPRS

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MAGFFSLGSG GGGGRGTRNN HQQSSNNTNP PPPQPNEINP ESWFLHRSED VTYKGFELWQ  60
QPPQHHHHQH HHHPHPEHNI QQQQQQQRHS NPLQDLYSSA GGLAVGPSRS SINISNESSR  120
SAFVMMRSSG SGSGGGSISC QDCGNQAKKD CEHMRCRTCC KSRGFHCHTH VKSTWVPAAK  180
RRERQQQLAT LQQQQHEQSQ SQQQELLHRD HPKRHRENMN PSGSSLVCTR LTSNASGLEM  240
GNFPPEVNSP AVFRCVRVSS IDDAEDQYAY QTAVNIGGHV FRGILYDHGL ETHYMAGESS  300
SGGTPSGLNL ITAAMATATS AVTTAAGATA AVVDSPAAGA FLDPSLYPAP LNTFMSGTQF  360
FPLPRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	4e-76	SRS family protein