PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028098108.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | NF-YC | ||||||||
Protein Properties | Length: 227aa MW: 25633.4 Da PI: 7.4505 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 30.5 | 7.6e-10 | 133 | 218 | 9 | 95 |
NF-YC 9 qiekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdi 95 + e+++d+ h +P+ ri +i+k+++ +is ea l+ ka e f+ + ++ a +++ + ++++v++ fdfl d XP_028098108.1 133 KNESSSDV-SHCFPMNRISRIVKSEDPDIRISQEAVFLINKASEKFLEVFCKDAYACAFLDHKSQVWYKHLSSVVSKRRRFDFLADL 218 34555555.689***********96655679***************8888888999999999999********************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MAKGNQMADT SRKKGAKMED KVQIHSNNGK NNNTKKKKKT NTSNGTDNDN KDEPEVLVVS 60 DSSVDSKNND GDEVDEALQV QDTDEDEEED EEEDAKSSGI TNQRINKAKN GDEKEKNGAT 120 KKKKKSKYGK NKKNESSSDV SHCFPMNRIS RIVKSEDPDI RISQEAVFLI NKASEKFLEV 180 FCKDAYACAF LDHKSQVWYK HLSSVVSKRR RFDFLADLAC FITAYAF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 121 | 133 | KKKKKSKYGKNKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07980.1 | 9e-22 | NF-YC family protein |