PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028097990.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 339aa    MW: 37941.4 Da    PI: 7.4132
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028097990.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH407.3e-13267312655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L+el+P+     +k  + a++L +AveYIk+Lq
  XP_028097990.1 267 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVEYIKELQ 312
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MNHQDEYRQY NNSHHQQSDS NSGLLRFRSA PSSLLSKFTN VGTDSSEKGP MNNQCSSPEA  60
QRLTHLTSQS LFQDLEEIKP LAINGFSVTS QLPPQYPRHT SGTQLAAMDN TSSYGVVGSI  120
GSSSLMRQTS SPAGLFSHLT AQNGMLSQIS EIDNESVEGS CHEDIKLGNG SRDPQFYSPG  180
YAFGSWNDSS HIHDNFSVLK RDLDNDEKLF TGIQNGELEN RMHILSHHLS LPKTSAEMAN  240
MEKLLHFQET VPCKVRAKRG CATHPRSIAE RVRRTRISER MRKLQELVPN MDKQTNTADM  300
LDLAVEYIKE LQKQYKILSE NRANCKCSSL QKPLPNLSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.11e-88bHLH family protein