PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028097641.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 318aa MW: 35872.9 Da PI: 4.5794

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028097641.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.2	6.4e-09	252	284	23	55
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp+++e+ +L++ +gL+++q+ +WF N+R ++ XP_028097641.1 252 PYPTEDEKSKLSEFTGLDQKQINNWFINQRKRH 284 8*****************************885 PP
2	ELK	37.4	5.4e-13	204	225	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrKYsgyL+sL++EF+ XP_028097641.1 204 ELKEMLLRKYSGYLSSLRKEFL 225 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MDELYRLHSS ISFSDHDHDV SGVGDFPTTL SGLHGPVDNM LQFEATEIEV GGSELSDLIK 60 AQIANHPLYP NLVSAYIECR KVGAPPEMAS LLEEISKENH PINSRSDIGA DPELDEFMES 120 YCEVLHRYKQ ELSKPFDEAT TFLSDIELQL SNLCKETLTT TTTFASANYH SDEGAGTSEE 180 DLSCGEVEAA ESQESSVARP GDQELKEMLL RKYSGYLSSL RKEFLKKRKK GKLPKDARIA 240 LLDWWNTHYR WPYPTEDEKS KLSEFTGLDQ KQINNWFINQ RKRHWKPSED MRFALMEGVS 300 GSIGGPMYFD NAGGSVDI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	220	229	LRKEFLKKRK
2	226	230	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	2e-81	TALE family protein