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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_028097450.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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| Family | ERF | ||||||||
| Protein Properties | Length: 325aa MW: 36630.3 Da PI: 6.1768 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 60.2 | 5e-19 | 120 | 169 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+++GVr+++ +g+W+AeIrdp r r +lg+f taeeAa +++a+ kl+g
XP_028097450.1 120 KFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTFNTAEEAAMVYDNAAIKLRG 169
89*******.**********82....35*************************99 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 325 aa Download sequence |
MDDSMSSMLR PIKYTEHRSL TKKLTKPKVS DGRTGVPRLV RISVTDPDAT DSSSDEEDEL 60 FSRQRIKKYV NEINIETACK TTVLIPHKKK KKKKKKKKSG TGGTIEANRK PMKVATVGRK 120 FRGVRQRPWG KWAAEIRDPA RRVRLWLGTF NTAEEAAMVY DNAAIKLRGP DALTNFITPP 180 TKENPPEINM TSVSGFESGD DSLNLSSPTS VLRFRTNSNN QVQETQPCFQ ECEGETSLGN 240 QSVVDYLSME IPFIDDFFNL EHPDPILFHD TPTLPSNLLS DNDFGDMFID PVNDFGFGSS 300 SPTWQVDDYF QDLGDFFTSD PLMSL |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 88 | 94 | KKKKKKK |
| 2 | 88 | 96 | KKKKKKKKK |
| 3 | 88 | 98 | KKKKKKKKKKK |
| 4 | 88 | 113 | KKKKKKKKKKKSGTGGTIEANRKPMK |
| 5 | 89 | 95 | KKKKKKK |
| 6 | 89 | 97 | KKKKKKKKK |
| 7 | 89 | 99 | KKKKKKKKKKK |
| 8 | 89 | 114 | KKKKKKKKKKKSGTGGTIEANRKPMK |
| 9 | 90 | 96 | KKKKKKK |
| 10 | 90 | 98 | KKKKKKKKK |
| 11 | 90 | 115 | KKKKKKKKKKKSGTGGTIEANRKPMK |
| 12 | 91 | 97 | KKKKKKK |
| 13 | 91 | 116 | KKKKKKKKKKKSGTGGTIEANRKPMK |
| 14 | 92 | 98 | KKKKKKK |
| 15 | 92 | 117 | KKKKKKKKKKKSGTGGTIEANRKPMK |
| 16 | 93 | 118 | KKKKKKKKKKKSGTGGTIEANRKPMK |
| 17 | 94 | 119 | KKKKKKKKKKKSGTGGTIEANRKPMK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT4G27950.1 | 3e-68 | ERF family protein | ||||
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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