PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028097424.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 305aa    MW: 33403.2 Da    PI: 4.3003
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028097424.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.10.00029280302223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C+ C+k+F++   L +H +  H
  XP_028097424.1 280 SCKSCSKTFNSETGLDSHTKAkH 302
                     6*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MEFWGVEVKA GQPLKVNPEV GSVIHISQAA LGEGKKGKGN DIVPLWVNIN GKKLVLGSLS  60
AEKFPQVSFD LVFEKEFELS HDWKDGSVYF CGYSADNQFD EDVEDEFDED DSSEDEDIRR  120
LITENGKDES KGEEAKPAAS KGKAAKLPKV TVVEPKKDDD SDEDDDTDDD DEDVDKVMMD  180
ASDDSDSEDE DDTDEEDDEE EEDEETPQKA ELSKKKRPTE SVSKTPVPAK KAKLDTPQKT  240
DGKKGGGHTA TPHPAKQAGK TPNTSEKSKE KTPKSDSKVS CKSCSKTFNS ETGLDSHTKA  300
KHGGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.25e-35C2H2 family protein