PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028097083.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NF-X1

Protein Properties

Length: 1120aa MW: 121879 Da PI: 7.9198

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028097083.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	21.8	4e-07	305	323	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H+C++ CH G+C+ Cp XP_028097083.1 305 CGRHRCEQVCHVGQCDACP 323 ******************8 PP
2	zf-NF-X1	18	6.4e-06	369	386	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H C+++CH+G C+ C XP_028097083.1 369 CGNHVCNEICHPGSCGDC 386 ****************99 PP
3	zf-NF-X1	18.6	4.1e-06	523	541	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H+C++lCH G CppC XP_028097083.1 523 CGQHSCESLCHSGHCPPCL 541 ******************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 1120 aa Download sequence
MSSQVRHDRN DNNNNNNRSR FPPQSGRREW VPRGATATAT VVSRPSNNFN SNLIGNDGDS 60 NSSLAARNSQ PRGNMGSRGQ MGRPSYQRRE RERSNKEERG LLGMNLGNQE EKTPKEDMSL 120 PQLLQEIQDK LMKGTVECMI CYDMVRRSAP IWSCSSCYSI FHLNCIKKWA RAPTSVDLST 180 EKNQGFNWRC PGCQSVQMTV LKEIRYLCFC GKRQEPPSDL YLTPHSCGEP CGKPLEKDFS 240 GPSGGKEDLC PHFCVLQCHP GPCPPCKAFA PPQLCPCGKK KITTRCFDRK SFLTCGQQCE 300 KLLDCGRHRC EQVCHVGQCD ACPVLVNAPC FCKKKMETVL CGEMEVKGEV KVEDGVFSCD 360 SICGKKLRCG NHVCNEICHP GSCGDCELLP GMIKTCYCGK TSLEDERRSC LDPIPTCSQV 420 CGKRLPCGVH HCEERCHAGN CARCTVLVTQ KCRCGSSSRT VECYKTTMEG EQFTCDKPCG 480 QKKNCGRHRC SERCCPLSNS NNSLTGDWDP HLCSMPCEKK LRCGQHSCES LCHSGHCPPC 540 LETIFTDLTC ACGRTSIPPP QPCGTPPPSC QYPCSVSQPC GHSSSHSCHF GDCPPCSVPI 600 AKECIGGHVV LRNLPCGSKD IRCNKLCGKT RQCGMHACAR ICHPAPCDSS CGPSSGSKAS 660 CGQMCGAPRR DCRHTCTALC HPFSPCPDVR CEFPVTITCS CGRITATVPC DAGGSSGGLN 720 VDTVFEASVI QKLPVPLQPV EANGKKIPLG QRKLTCDDEC AKMDRKRVLA DAFGVTTPNL 780 DALHFGENSV VSEVLADLLR RDPKWVLSVE ERCKFLVLGR VRGGSNALRV HVFCPMSKEK 840 RDVVRLIAER WKLVVNAAGW EPKRFIVVHV TSKSKAPSRV LGATKGSILG NIIHPPVFDP 900 LTDMDPRLVV ALFDLPRDAD ISALVLRFGG ECELVWLNDK NALAVFSDPA RAATAMRRLD 960 QGSVYYGAVV VPQNGGVSVA SAGANSWGGS GLAKDGGGVS ASLKGNAWVK AVVQEPNWRE 1020 SSWDGEEWSA DSPNMEASVW KGKKDAPIAT SANRWSVLDS VTNLSSSSTS AGMEDPGNLT 1080 GTQMVSDFEP KASGSNMGKQ KESNHEGMSD VVDDWEQAYD

Sequence ? help Back to Top

Protein Sequence Length: 1120 aa Download sequence

MSSQVRHDRN DNNNNNNRSR FPPQSGRREW VPRGATATAT VVSRPSNNFN SNLIGNDGDS  60
NSSLAARNSQ PRGNMGSRGQ MGRPSYQRRE RERSNKEERG LLGMNLGNQE EKTPKEDMSL  120
PQLLQEIQDK LMKGTVECMI CYDMVRRSAP IWSCSSCYSI FHLNCIKKWA RAPTSVDLST  180
EKNQGFNWRC PGCQSVQMTV LKEIRYLCFC GKRQEPPSDL YLTPHSCGEP CGKPLEKDFS  240
GPSGGKEDLC PHFCVLQCHP GPCPPCKAFA PPQLCPCGKK KITTRCFDRK SFLTCGQQCE  300
KLLDCGRHRC EQVCHVGQCD ACPVLVNAPC FCKKKMETVL CGEMEVKGEV KVEDGVFSCD  360
SICGKKLRCG NHVCNEICHP GSCGDCELLP GMIKTCYCGK TSLEDERRSC LDPIPTCSQV  420
CGKRLPCGVH HCEERCHAGN CARCTVLVTQ KCRCGSSSRT VECYKTTMEG EQFTCDKPCG  480
QKKNCGRHRC SERCCPLSNS NNSLTGDWDP HLCSMPCEKK LRCGQHSCES LCHSGHCPPC  540
LETIFTDLTC ACGRTSIPPP QPCGTPPPSC QYPCSVSQPC GHSSSHSCHF GDCPPCSVPI  600
AKECIGGHVV LRNLPCGSKD IRCNKLCGKT RQCGMHACAR ICHPAPCDSS CGPSSGSKAS  660
CGQMCGAPRR DCRHTCTALC HPFSPCPDVR CEFPVTITCS CGRITATVPC DAGGSSGGLN  720
VDTVFEASVI QKLPVPLQPV EANGKKIPLG QRKLTCDDEC AKMDRKRVLA DAFGVTTPNL  780
DALHFGENSV VSEVLADLLR RDPKWVLSVE ERCKFLVLGR VRGGSNALRV HVFCPMSKEK  840
RDVVRLIAER WKLVVNAAGW EPKRFIVVHV TSKSKAPSRV LGATKGSILG NIIHPPVFDP  900
LTDMDPRLVV ALFDLPRDAD ISALVLRFGG ECELVWLNDK NALAVFSDPA RAATAMRRLD  960
QGSVYYGAVV VPQNGGVSVA SAGANSWGGS GLAKDGGGVS ASLKGNAWVK AVVQEPNWRE  1020
SSWDGEEWSA DSPNMEASVW KGKKDAPIAT SANRWSVLDS VTNLSSSSTS AGMEDPGNLT  1080
GTQMVSDFEP KASGSNMGKQ KESNHEGMSD VVDDWEQAYD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein