PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028096805.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 290aa    MW: 33046.1 Da    PI: 6.5204
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028096805.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.61.8e-15855148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+ Ed +lv +v+++G + W+ Ia+  g++Rt+k+c++rw +yl
   XP_028096805.1  8 KGPWTEHEDVQLVFYVNLFGDRKWDFIAKVSGLKRTGKSCRLRWVNYL 55
                     79********************************************97 PP
2Myb_DNA-binding51.42.5e-1661106148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      r ++T+ E+ l +++++++G++ W++Iar+++ gRt++++k++w++++
   XP_028096805.1  61 RCKMTPHEERLVLELHNKWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 106
                      6689******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MVQEEIRKGP WTEHEDVQLV FYVNLFGDRK WDFIAKVSGL KRTGKSCRLR WVNYLHPGLK  60
RCKMTPHEER LVLELHNKWG NRWSRIARKL PGRTDNEIKN YWRTHMRKKA QERKRATSPI  120
SSVSNCSSAS SNAPVDSTPV VETKERSFYD TGGVVFAPSS ISTSKSSSAS LSNNPPMDSM  180
VTVAETKEIS FFDTGGLEMS VPKGKKDQEE YSMDDIWKDI AMSENETIKS YHDGYGEEGC  240
NFFGQTMTSP VWNYAPDLAW MMEEEESKLF PAISDQIFGC YEQASSDLTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.19e-78MYB family protein