PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028096669.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | LFY | ||||||||
Protein Properties | Length: 397aa MW: 44041.6 Da PI: 8.0652 | ||||||||
Description | LFY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FLO_LFY | 653.1 | 3.8e-199 | 1 | 377 | 1 | 384 |
FLO_LFY 1 mdpeafsaslfkwdpraaaaapparlleeaavseap.leaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmksls 94 mdp+afsaslfkwdpraa+ +pp+rll a +++p aa a+ r+l +le+lf+ayG+ry+t+akiaelGftv+tL+dmk+eeldd+m+sls XP_028096669.1 1 MDPDAFSASLFKWDPRAAVPPPPTRLLDAVAPPPPPpPVAAYAVRPRELGGLEDLFQAYGIRYYTAAKIAELGFTVNTLMDMKEEELDDMMNSLS 95 9****************999999999888776666623333444555688********************************************* PP FLO_LFY 95 eifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglg....eaelvaaeekkseeek 185 +ifr+dllvGeryGikaavraerrrl+ee+ ++rr++ls+d+++a dalsqeglseepvq+ekea+gsgg+g g +e+vaa+ ++k XP_028096669.1 96 QIFRWDLLVGERYGIKAAVRAERRRLDEED--TRRRHFLSADTTNAHDALSQEGLSEEPVQQEKEAVGSGGGGGGggggMWEVVAAA---CGKKK 185 ****************************88..89999********************************665544000044444443...33444 PP FLO_LFY 186 kkaskkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtk 280 k++ +++++rkk + ++++ e+d+ ++++g ++++rqrehPfivtepgevargkknGLDYLf+LyeqCrefL+qvq+iakerGekcPtk XP_028096669.1 186 KQQ-QQQRRRKKGEGRMTS------LEDDDGSDDGGGGSDQRQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTK 273 444.323333333322222......2222233344555679****************************************************** PP FLO_LFY 281 vtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLr 375 vtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaa+qgwdida+fnahprL+iWYvPtkLr XP_028096669.1 274 VTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRAFKERGENVGAWRQACYKPLVAIAAQQGWDIDAIFNAHPRLAIWYVPTKLR 368 *********************************************************************************************** PP FLO_LFY 376 qLChlersk 384 qLCh+ers+ XP_028096669.1 369 QLCHAERSN 377 *******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 397 aa Download sequence |
MDPDAFSASL FKWDPRAAVP PPPTRLLDAV APPPPPPPVA AYAVRPRELG GLEDLFQAYG 60 IRYYTAAKIA ELGFTVNTLM DMKEEELDDM MNSLSQIFRW DLLVGERYGI KAAVRAERRR 120 LDEEDTRRRH FLSADTTNAH DALSQEGLSE EPVQQEKEAV GSGGGGGGGG GGMWEVVAAA 180 CGKKKKQQQQ QRRRKKGEGR MTSLEDDDGS DDGGGGSDQR QREHPFIVTE PGEVARGKKN 240 GLDYLFHLYE QCREFLIQVQ NIAKERGEKC PTKVTNQVFR YAKKAGASYI NKPKMRHYVH 300 CYALHCLDEE ASNALRRAFK ERGENVGAWR QACYKPLVAI AAQQGWDIDA IFNAHPRLAI 360 WYVPTKLRQL CHAERSNVGG GGGSSSVSGG RAEHLPF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 183 | 194 | KKKKQQQQQRRR |
2 | 184 | 195 | KKKKQQQQQRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61850.1 | 1e-141 | LFY family protein |