PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028096224.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C3H
Protein Properties Length: 506aa    MW: 57417.6 Da    PI: 6.4025
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028096224.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH201.2e-0690112427
                     ---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaHgp 27 
                     ++C f++  G+C+ GdrC+F Hgp
  XP_028096224.1  90 APCYFYFN-GFCNKGDRCSFLHGP 112
                     69******.*************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 506 aa     Download sequence    
MDEEELQKRN TDCVYFLASP LTCKKGIECE YRHSEIARLN PRDCCYWLAG SCFNPSCAFR  60
HPPLDTHTEV SSKSAPPQSQ CSAPTNKVNA PCYFYFNGFC NKGDRCSFLH GPNEDGTPAW  120
KSSEVTGALP LENKASARSD AGSAPIETFP IPSEAAPKRE AEIQSTLKED VQSALNNVKD  180
QSASPHLSTS DCEETSVRSD TLLLEKGLIQ SRSLVCTDQS SEEQVDGPIE REDWLESSPG  240
FDVLVGDISE GLGYEDDQEY LLSVDRDGRE LNGNFLGYDY EDRVEYDPTY HDAGILNDQE  300
RRDSHDQFDN YEQRFDYIRK VHGCSREKKM LDPRKRKLLT VDLVIDGRRG VDLRDHLKKH  360
RVIDGLPVTR FSRRNTNTSS FLADRSRERS RQHGRFRDSF SNRPRQHYKE KRQSKPHFLS  420
SEISRKPVSR KRRLTEESTM FTGPKTLAQI KEEKRKAPEN GYSPGGLIGH SSQTTSEEFQ  480
SPKPLSEILK DKKKLGLVLD ANNDSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1333338PRKRKL
2430456RKRRLTEESTMFTGPKTLAQIKEEKRK