PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028096224.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | C3H | ||||||||
Protein Properties | Length: 506aa MW: 57417.6 Da PI: 6.4025 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 20 | 1.2e-06 | 90 | 112 | 4 | 27 |
---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHgp 27 ++C f++ G+C+ GdrC+F Hgp XP_028096224.1 90 APCYFYFN-GFCNKGDRCSFLHGP 112 69******.*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 506 aa Download sequence |
MDEEELQKRN TDCVYFLASP LTCKKGIECE YRHSEIARLN PRDCCYWLAG SCFNPSCAFR 60 HPPLDTHTEV SSKSAPPQSQ CSAPTNKVNA PCYFYFNGFC NKGDRCSFLH GPNEDGTPAW 120 KSSEVTGALP LENKASARSD AGSAPIETFP IPSEAAPKRE AEIQSTLKED VQSALNNVKD 180 QSASPHLSTS DCEETSVRSD TLLLEKGLIQ SRSLVCTDQS SEEQVDGPIE REDWLESSPG 240 FDVLVGDISE GLGYEDDQEY LLSVDRDGRE LNGNFLGYDY EDRVEYDPTY HDAGILNDQE 300 RRDSHDQFDN YEQRFDYIRK VHGCSREKKM LDPRKRKLLT VDLVIDGRRG VDLRDHLKKH 360 RVIDGLPVTR FSRRNTNTSS FLADRSRERS RQHGRFRDSF SNRPRQHYKE KRQSKPHFLS 420 SEISRKPVSR KRRLTEESTM FTGPKTLAQI KEEKRKAPEN GYSPGGLIGH SSQTTSEEFQ 480 SPKPLSEILK DKKKLGLVLD ANNDSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 333 | 338 | PRKRKL |
2 | 430 | 456 | RKRRLTEESTMFTGPKTLAQIKEEKRK |