PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028096173.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 466aa    MW: 50372.9 Da    PI: 5.0128
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028096173.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3665.3e-112914633374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                      lLl+cAe+v+ ++l  a+ lL ++sel+sp g++ +R+aayf+eAL+ar+ +s+ ++y+ l+ ++ +  +s++  +al+ ++ +sP++kfsh+t
  XP_028096173.1  91 GLLLQCAECVAMDNLDDASDLLPEISELSSPFGSSPERVAAYFAEALQARIISSCLGTYSPLTIKALTLARSQKICNALQSYNSISPLIKFSHFT 185
                     58******************************************************************999************************ PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
                     aNqaI +a++ge+rvH+iD+di+qGlQWp L++ LasR+++  s+RiTgvgs    s e le+tg+rLa+fA++lg+pfef++l  k  +  +l+
  XP_028096173.1 186 ANQAIFQALDGEDRVHVIDLDIMQGLQWPGLFHILASRSRKIRSMRITGVGS----SIELLEATGRRLADFASSLGLPFEFQPLEGKVGNITDLS 276
                     ****************************************************....9**************************988888899*** PP

            GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak............l 275
                     +L v++gE+++V++++  h l+d ++s       +L+l+  l+Pk++++veq+++h +++Fl rf+eal+yysalfd+l+              +
  XP_028096173.1 277 QLGVRSGETTVVHWMH--HCLYDITGSDLG----TLRLLTLLRPKLITMVEQDLSH-GGNFLGRFVEALHYYSALFDALAGMdddggggsggggA 364
                     **************99..777777777777....9*********************.789*******************887799*****99987 PP

            GRAS 276 preseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve.eesgslvlgWkdrpLvs 369
                     + +  er+ vE++l+g ei+n+va  g +r+ + + +e+W++ l++ GF+pv+l  + a+qa+lll +++++gy++  e++g+l lgWkd +L++
  XP_028096173.1 365 AVHGGERHLVEQQLFGCEIRNIVAVGGPKRTGEVK-VERWSDELRANGFRPVSLAGNPAAQANLLLGMFPWKGYTLVeENNGCLKLGWKDLSLLT 458
                     7777*************************998887.9*************************************97626688999********** PP

            GRAS 370 vSaWr 374
                     +SaW+
  XP_028096173.1 459 ASAWQ 463
                     ****6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    
MLQSLVPQTP LNPNPSPNST NSAMRTKRSL DLAAAGGESS CEQDEDSSRK RRNYSVDEAT  60
ISGEKTTGEH EERGEEAVVI EGESSGLRLL GLLLQCAECV AMDNLDDASD LLPEISELSS  120
PFGSSPERVA AYFAEALQAR IISSCLGTYS PLTIKALTLA RSQKICNALQ SYNSISPLIK  180
FSHFTANQAI FQALDGEDRV HVIDLDIMQG LQWPGLFHIL ASRSRKIRSM RITGVGSSIE  240
LLEATGRRLA DFASSLGLPF EFQPLEGKVG NITDLSQLGV RSGETTVVHW MHHCLYDITG  300
SDLGTLRLLT LLRPKLITMV EQDLSHGGNF LGRFVEALHY YSALFDALAG MDDDGGGGSG  360
GGGAAVHGGE RHLVEQQLFG CEIRNIVAVG GPKRTGEVKV ERWSDELRAN GFRPVSLAGN  420
PAAQANLLLG MFPWKGYTLV EENNGCLKLG WKDLSLLTAS AWQPSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.11e-165GRAS family protein