PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028096078.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 728aa MW: 80116 Da PI: 6.5434

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028096078.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.4	2.7e-09	581	618	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gL+ +qV++WF N R + XP_028096078.1 581 FEHflHPYPTDTDKHMLASQTGLSRNQVSNWFINARVR 618 554459******************************87 PP
2	BELL	107.6	7.6e-35	435	504	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e q+kkakLl ++ee+++rYkqy++q+++v+ssF++vagl a+pY+s+ lk++SrhFrcLk+ai++q+ XP_028096078.1 435 PEYQQKKAKLLFMQEEICRRYKQYHQQMEMVVSSFDTVAGLSVAAPYISFVLKTVSRHFRCLKNAISDQL 504 589****************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 728 aa Download sequence
MELGNFRPEA HVAQQSRRDK LRVQQSSQAQ HLEDYPNNLE QLSVHHGLNP DLIQVSNLRY 60 GNISYNPVMF SPEMLNFAVN SQEQPANRPV KVSDEPQNCG NWKSISSQQQ SCDWIANYSS 120 GLTGSESNQN NISSSPYLKP SFNGYQGVQP SLTNPTGEVC SQNSQKRYGE MHFNSPPIYQ 180 NAPLTVDNGA RGSWTDGGNE LVLLPTYGNE SNPVRLNDSS AWIGRLDEEG CHQWSGELSF 240 LANNSSRDLR TVATSDSNTQ GLSLSLSTKT LPNQFGEELH SGTGVFNDHH DSKTLESDYL 300 CPNSKPSIGS KVLGNDCQGM VGSSSTFTHR NTGPLGPFTG YATILKGSKF LKPAQLLLDE 360 ICSTVMASKS IEMCEVSDDM VSDGVKGSSE AVNASESMVG AKGGGDSGVS STTFYYSNEI 420 SGDTGVRSSS GEYRPEYQQK KAKLLFMQEE ICRRYKQYHQ QMEMVVSSFD TVAGLSVAAP 480 YISFVLKTVS RHFRCLKNAI SDQLKHIRKA LGEDFSSPTI GTASSSKGDT STSRLTNMDH 540 GFTKPKTGGP NLGFLEAQQH IWRPQRGLPE RAVSVLRAWL FEHFLHPYPT DTDKHMLASQ 600 TGLSRNQVSN WFINARVRVW KPMVEEIHML ETKGLAEPNS NLGKIDGEPN AENDHQPANK 660 VSETAMSSKQ VECLQIGSLA GTGDEHGHRQ NTQWNQEKRS EAEQCQIPAS MIVFRFGVLC 720 HTSVAGLK

Sequence ? help Back to Top

Protein Sequence Length: 728 aa Download sequence

MELGNFRPEA HVAQQSRRDK LRVQQSSQAQ HLEDYPNNLE QLSVHHGLNP DLIQVSNLRY  60
GNISYNPVMF SPEMLNFAVN SQEQPANRPV KVSDEPQNCG NWKSISSQQQ SCDWIANYSS  120
GLTGSESNQN NISSSPYLKP SFNGYQGVQP SLTNPTGEVC SQNSQKRYGE MHFNSPPIYQ  180
NAPLTVDNGA RGSWTDGGNE LVLLPTYGNE SNPVRLNDSS AWIGRLDEEG CHQWSGELSF  240
LANNSSRDLR TVATSDSNTQ GLSLSLSTKT LPNQFGEELH SGTGVFNDHH DSKTLESDYL  300
CPNSKPSIGS KVLGNDCQGM VGSSSTFTHR NTGPLGPFTG YATILKGSKF LKPAQLLLDE  360
ICSTVMASKS IEMCEVSDDM VSDGVKGSSE AVNASESMVG AKGGGDSGVS STTFYYSNEI  420
SGDTGVRSSS GEYRPEYQQK KAKLLFMQEE ICRRYKQYHQ QMEMVVSSFD TVAGLSVAAP  480
YISFVLKTVS RHFRCLKNAI SDQLKHIRKA LGEDFSSPTI GTASSSKGDT STSRLTNMDH  540
GFTKPKTGGP NLGFLEAQQH IWRPQRGLPE RAVSVLRAWL FEHFLHPYPT DTDKHMLASQ  600
TGLSRNQVSN WFINARVRVW KPMVEEIHML ETKGLAEPNS NLGKIDGEPN AENDHQPANK  660
VSETAMSSKQ VECLQIGSLA GTGDEHGHRQ NTQWNQEKRS EAEQCQIPAS MIVFRFGVLC  720
HTSVAGLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	9e-85	TALE family protein