PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028095989.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | FAR1 | ||||||||
Protein Properties | Length: 216aa MW: 24999.4 Da PI: 9.1684 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 75.5 | 1.1e-23 | 31 | 119 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+ + +k+ ++g+it+r fvC+keg+r +k++ ++++r+e r+gC+a+l +k ++ +k+ v++++++HnH ++ XP_028095989.1 31 NFYNAYGGRMGFSIRRGYVNKN-KEGQITSRLFVCNKEGFRGIDKRD-PLTKNPRQEVRIGCQARLIIKWDRnIHKFFVDEFVEQHNHIFV 119 6********************9.6677*****************999.999******************999899*************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MEPNNVENDG GDCDWKPRVH MTFDTEQEAY NFYNAYGGRM GFSIRRGYVN KNKEGQITSR 60 LFVCNKEGFR GIDKRDPLTK NPRQEVRIGC QARLIIKWDR NIHKFFVDEF VEQHNHIFVP 120 TKCTHMLPSQ RKVSASQATE IDLAEKSGIQ FNAAFELMGN EVGGRESLGF TKVDQKNYLR 180 TKRQKCLAYG EAGSILQYFR EKTLENPSFF LLGPIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-35 | FAR1 family protein |