PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028095908.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 185aa MW: 21241.1 Da PI: 8.4471 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 54.5 | 3.8e-17 | 8 | 68 | 30 | 90 |
FAR1 30 krtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 + +vC+keg+r+ +k++ ++++raetrtgC+a+l +k+++ +gk++vt+++++HnH+l+ XP_028095908.1 8 RGLLVCNKEGFRKVDKRD-PLSKNSRAETRTGCEARLYIKLHEgNGKYVVTDFKEKHNHDLV 68 5568***********999.9999*************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 185 aa Download sequence |
MTDDGETRGL LVCNKEGFRK VDKRDPLSKN SRAETRTGCE ARLYIKLHEG NGKYVVTDFK 60 EKHNHDLVSP ECAHMLPSQR KISTTQAIQL DLAAQSGLRL GQSFELMGRE AAKLDQKGFT 120 KLDSKNYLRT KRQQSLAYGE VGNVLQYFKE KSLQNPSFFY AFQLDNEEQI TNMFWVDAQM 180 IMDYA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G38180.1 | 4e-35 | FAR1 family protein |