PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028095867.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 422aa MW: 48874.6 Da PI: 7.1885

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028095867.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51.1	4.4e-16	32	125	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn+YAk GFs+rks+ +++k+ + +++ + s eg+r ++ + +e++r ++a r+gCka++++ + gk++vt++ +HnH+la XP_028095867.1 32 FYNAYAKANGFSIRKSRFNTNKQGK-VVSMLWLYSGEGQRLPKYLDrvAENRRAPKALIRVGCKAQFHIWYDLeageGGKYVVTHFIADHNHKLA 125 9****************997766.55555556889999888777668888999********986543335599************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MVDDAHGDDM IGEVECAVLE QKFDYVEDGK AFYNAYAKAN GFSIRKSRFN TNKQGKVVSM 60 LWLYSGEGQR LPKYLDRVAE NRRAPKALIR VGCKAQFHIW YDLEAGEGGK YVVTHFIADH 120 NHKLAEQHCV MYLRSHRGLN SADKAQGTNK SRLQSTISHM DNKLQNLFWV DSKSLADYAK 180 FGDALIFDST YHTNAYKKPF VMLAGVTNHF TTTLFACVLL ANEIIDTYTW VLETFMEVID 240 NKAPVFVLTD GDKAMGEAIR RVFPDVRHRL CNWHLGKNAV SNVHKSGFAH AFKQCMEMEA 300 DAAKLEDGWT RMVEKFGLEN NSWVLETYEK RHMWAEAYMH GHFFARMKSF KQCMEMETDE 360 AKLEDGWTRM VEKFGLENNS WVLETYEKRH MWAEAYMHGH FFARMKSTQC SESMNAYFNP 420 FL

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MVDDAHGDDM IGEVECAVLE QKFDYVEDGK AFYNAYAKAN GFSIRKSRFN TNKQGKVVSM  60
LWLYSGEGQR LPKYLDRVAE NRRAPKALIR VGCKAQFHIW YDLEAGEGGK YVVTHFIADH  120
NHKLAEQHCV MYLRSHRGLN SADKAQGTNK SRLQSTISHM DNKLQNLFWV DSKSLADYAK  180
FGDALIFDST YHTNAYKKPF VMLAGVTNHF TTTLFACVLL ANEIIDTYTW VLETFMEVID  240
NKAPVFVLTD GDKAMGEAIR RVFPDVRHRL CNWHLGKNAV SNVHKSGFAH AFKQCMEMEA  300
DAAKLEDGWT RMVEKFGLEN NSWVLETYEK RHMWAEAYMH GHFFARMKSF KQCMEMETDE  360
AKLEDGWTRM VEKFGLENNS WVLETYEKRH MWAEAYMHGH FFARMKSTQC SESMNAYFNP  420
FL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-45	FAR1 family protein