PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028095382.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GRAS | ||||||||
Protein Properties | Length: 435aa MW: 48990.9 Da PI: 5.1592 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 285.6 | 1.4e-87 | 42 | 428 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsPilkfs 94 ++lLl+cA a++s+d++l+q++++ l++ as gdp+qRl++ f +AL a+ +r ++ ++ +s+ + + +++ +l ++++ P+++f+ XP_028095382.1 42 EKLLLHCASALESNDATLVQQVMWVLNNVASTVGDPNQRLTSWFSRALIAKASRVFPTAMNFNGSSTVH----RRMMSVIELagYVDLIPWHRFG 132 689***************************************************777666555444444....34444444455*********** PP GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl..... 181 + + N+aI a++g+++vH++Df+i++++QWp+L++aLa+RpegppslRi + ++ + ++ee+g rLa+fA+ +++pfefnv+ XP_028095382.1 133 FCASNSAIFIAIQGCSKVHVLDFSITHCMQWPTLIDALAKRPEGPPSLRISVPYWRPQVppfLNVSMEEVGLRLANFAKLIDLPFEFNVIedlss 227 ***************************************************9766444468899**************************99987 PP GRAS 182 ........vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles...erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyys 265 + + l++l+ +L+++ +Eal++n+++ l +l+d++ + + r+++L+++k l+P+++v+v++++d+++ sF r++ +++y + XP_028095382.1 228 skecpnfdYDSLLSQLNRLTLNLRDDEALVINCQHWLRYLPDDKKGSVHgdsWRNAFLETIKVLNPRIIVMVDEDSDLGTMSFTSRITTCFNYLW 322 7666655555556666777779999****************9977665555599***************************************** PP GRAS 266 alfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvl 360 fd+le+ lp++s +r +E+ +g +i+n++ eg +r+er e+ + ++r+++ G++++p+ e++ ++++ll++++ g+ ++++++ lvl XP_028095382.1 323 IPFDALETFLPKDSGQRLDYEAD-IGHKIENIIGFEGIQRIERLESGINLSQRMKNKGYSSLPFCEETIGEVNSLLEEHA-SGWGMKKDDDMLVL 415 ***********************.********************************************************.899*********** PP GRAS 361 gWkdrpLvsvSaW 373 +Wk+++ v +SaW XP_028095382.1 416 TWKGHNSVYASAW 428 ************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 435 aa Download sequence |
MRAELRDNNT PISFQNPNLF PQSSLSGALK GCLGNLDGAC IEKLLLHCAS ALESNDATLV 60 QQVMWVLNNV ASTVGDPNQR LTSWFSRALI AKASRVFPTA MNFNGSSTVH RRMMSVIELA 120 GYVDLIPWHR FGFCASNSAI FIAIQGCSKV HVLDFSITHC MQWPTLIDAL AKRPEGPPSL 180 RISVPYWRPQ VPPFLNVSME EVGLRLANFA KLIDLPFEFN VIEDLSSSKE CPNFDYDSLL 240 SQLNRLTLNL RDDEALVINC QHWLRYLPDD KKGSVHGDSW RNAFLETIKV LNPRIIVMVD 300 EDSDLGTMSF TSRITTCFNY LWIPFDALET FLPKDSGQRL DYEADIGHKI ENIIGFEGIQ 360 RIERLESGIN LSQRMKNKGY SSLPFCEETI GEVNSLLEEH ASGWGMKKDD DMLVLTWKGH 420 NSVYASAWVP CGFED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49950.1 | 1e-117 | GRAS family protein |