PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028095248.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GRF | ||||||||
Protein Properties | Length: 188aa MW: 21285 Da PI: 9.9198 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 79.1 | 4.1e-25 | 126 | 170 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 ++epgrCrRtDGKkWRCs++v++++k+C+rH+hrgr+rsrk++e+ XP_028095248.1 126 EPEPGRCRRTDGKKWRCSKDVVPNHKYCQRHIHRGRHRSRKHVET 170 69****************************************997 PP | |||||||
2 | QLQ | 46.6 | 1.1e-16 | 54 | 89 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT Q q+L++Q+l+y y+ a++ vPp+L+++i+k XP_028095248.1 54 GFTFLQMQELEQQALIYNYIEAGLAVPPHLVLPIWK 89 69*********************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MEPQNPPPKI ARLADNATSR TSCREVSPPT GLGLSLELGH HRSSNRHGCS KSSGFTFLQM 60 QELEQQALIY NYIEAGLAVP PHLVLPIWKS FAGYLSSVNG ACLQQQYFAN FMGHSPLYYD 120 YKNSMEPEPG RCRRTDGKKW RCSKDVVPNH KYCQRHIHRG RHRSRKHVET PQLLRTTSTT 180 NTTSTSTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36400.1 | 2e-36 | GRF family protein |