PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028094833.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 798aa MW: 87796.8 Da PI: 6.2749

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028094833.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.1	1.6e-18	217	317	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ XP_028094833.1 217 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLRIQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PEGK 309 99************************555567778***********99899999999.*******************876.8888 PP .EEEEE-S CS B3 92 lvvkvfrk 99 l+++++++ XP_028094833.1 310 LLMGFRKA 317 88888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 798 aa Download sequence
MSTTNNDGEM RLTSVDNQMD GGNVDNMNLK QSDSNEELNG LKDLLPSHNN HANSGQIKEE 60 EVLPAPGEVG TMNSSNFNQA SVGSSETAKV DTYKTNMGIK DTDESLAQTN LTIALTAPSG 120 NPNPFPGAVI EERESGKTIS SLQQVSRSRH LLPKPPKAIL AAGLETNAGM VPQIRVARPP 180 AEGRVKNQLL PRYWPRITDQ ELQQISGDSN STIVPLFEKV LSASDAGRIG RLVLPKACAE 240 AYFPPISQPE GLPLRIQDVK GKEWVFQFRF WPNNNSRMYV LEGVTPCIQS MQLQAGDTVT 300 FSRMDPEGKL LMGFRKASNS IAMQATHLSA IPNGALSSEP FFSGVIENLS MTSGYSGLLQ 360 SLKGSTDPHL NALSKHLNSA GGDFSWHVMD KHGSDTKDGL LPQSMLVQER KRSRNIGSKS 420 KRLLIDSQDA LELKLTWEEA QDMLRPPVSE KPSIVTIEDH EFEEYEEPPV FGKRSIFVAR 480 LTGGQEQWTQ CDSCSKWRRL PADILLPPKW TCSDNILDQC RCSCSAPDEL SPRELESLLR 540 LNKDFKKRRM VTSHRLVQEH ESAGLDALAN AAVLGDDATD PGAATVATTT KHPRHRPGCS 600 CIVCIQPPSG KGKHKPTCTC NVCMTVKRRF KTLMMRKKKR QSEREAEIAQ RNHYLWGTKD 660 ESEVDSTIRQ VTSNRDSLDN KDILAQSNNL SLKLPEIGKG GLDLNCDPEH EEHLHQGSTN 720 VSMMSLLQVA SLPLETYLKQ NGLTSLVSEQ QGSSGSHSLA QAAGESEGRV QEDHCVAPVV 780 QELESRGDDL DQTRNDPS

Sequence ? help Back to Top

Protein Sequence Length: 798 aa Download sequence

MSTTNNDGEM RLTSVDNQMD GGNVDNMNLK QSDSNEELNG LKDLLPSHNN HANSGQIKEE  60
EVLPAPGEVG TMNSSNFNQA SVGSSETAKV DTYKTNMGIK DTDESLAQTN LTIALTAPSG  120
NPNPFPGAVI EERESGKTIS SLQQVSRSRH LLPKPPKAIL AAGLETNAGM VPQIRVARPP  180
AEGRVKNQLL PRYWPRITDQ ELQQISGDSN STIVPLFEKV LSASDAGRIG RLVLPKACAE  240
AYFPPISQPE GLPLRIQDVK GKEWVFQFRF WPNNNSRMYV LEGVTPCIQS MQLQAGDTVT  300
FSRMDPEGKL LMGFRKASNS IAMQATHLSA IPNGALSSEP FFSGVIENLS MTSGYSGLLQ  360
SLKGSTDPHL NALSKHLNSA GGDFSWHVMD KHGSDTKDGL LPQSMLVQER KRSRNIGSKS  420
KRLLIDSQDA LELKLTWEEA QDMLRPPVSE KPSIVTIEDH EFEEYEEPPV FGKRSIFVAR  480
LTGGQEQWTQ CDSCSKWRRL PADILLPPKW TCSDNILDQC RCSCSAPDEL SPRELESLLR  540
LNKDFKKRRM VTSHRLVQEH ESAGLDALAN AAVLGDDATD PGAATVATTT KHPRHRPGCS  600
CIVCIQPPSG KGKHKPTCTC NVCMTVKRRF KTLMMRKKKR QSEREAEIAQ RNHYLWGTKD  660
ESEVDSTIRQ VTSNRDSLDN KDILAQSNNL SLKLPEIGKG GLDLNCDPEH EEHLHQGSTN  720
VSMMSLLQVA SLPLETYLKQ NGLTSLVSEQ QGSSGSHSLA QAAGESEGRV QEDHCVAPVV  780
QELESRGDDL DQTRNDPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	627	638	KRRFKTLMMRKK
2	627	640	KRRFKTLMMRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein