PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028094832.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 872aa MW: 95865.1 Da PI: 6.6177

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028094832.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.9	1.8e-18	327	427	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ XP_028094832.1 327 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLRIQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PEGK 419 99************************555567778***********99899999999.*******************876.8888 PP .EEEEE-S CS B3 92 lvvkvfrk 99 l+++++++ XP_028094832.1 420 LLMGFRKA 427 88888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 872 aa Download sequence
MGSRACTNGL CGASSSNEWK KGWPLRSGEF ANLCDKCGSA YEQLVFCDTF HLKDTGWREC 60 SLCGKRLHCG CIASSSLLEL LDSGGVRCIG CTKSLGLQPA LNDEKPKGLS MSTTNNDGEM 120 RLTSVDNQMD GGNVDNMNLK QSDSNEELNG LKDLLPSHNN HANSGQIKEE EVLPAPGEVG 180 TMNSSNFNQA SVGSSETAKV DTYKTNMGIK DTDESLAQTN LTIALTAPSG NPNPFPGAVI 240 EERESGKTIS SLQQVSRSRH LLPKPPKAIL AAGLETNAGM VPQIRVARPP AEGRVKNQLL 300 PRYWPRITDQ ELQQISGDSN STIVPLFEKV LSASDAGRIG RLVLPKACAE AYFPPISQPE 360 GLPLRIQDVK GKEWVFQFRF WPNNNSRMYV LEGVTPCIQS MQLQAGDTVT FSRMDPEGKL 420 LMGFRKASNS IAMQSLKGST DPHLNALSKH LNSAGGDFSW HVMDKHGSDT KDGLLPQSML 480 VQERKRSRNI GSKSKRLLID SQDALELKLT WEEAQDMLRP PVSEKPSIVT IEDHEFEEYE 540 EPPVFGKRSI FVARLTGGQE QWTQCDSCSK WRRLPADILL PPKWTCSDNI LDQCRCSCSA 600 PDELSPRELE SLLRLNKDFK KRRMVTSHRL VQEHESAGLD ALANAAVLGD DATDPGAATV 660 ATTTKHPRHR PGCSCIVCIQ PPSGKGKHKP TCTCNVCMTV KRRFKTLMMR KKKRQSEREA 720 EIAQRNHYLW GTKDESEVDS TIRQVTSNRD SLDNKDILAQ SNNLSLKLPE IGKGGLDLNC 780 DPEHEEHLHQ GSTNVSMMSL LQVASLPLET YLKQNGLTSL VSEQQGSSGS HSLAQAAGES 840 EGRVQEDHCV APVVQELESR GDDLDQTRND PS

Sequence ? help Back to Top

Protein Sequence Length: 872 aa Download sequence

MGSRACTNGL CGASSSNEWK KGWPLRSGEF ANLCDKCGSA YEQLVFCDTF HLKDTGWREC  60
SLCGKRLHCG CIASSSLLEL LDSGGVRCIG CTKSLGLQPA LNDEKPKGLS MSTTNNDGEM  120
RLTSVDNQMD GGNVDNMNLK QSDSNEELNG LKDLLPSHNN HANSGQIKEE EVLPAPGEVG  180
TMNSSNFNQA SVGSSETAKV DTYKTNMGIK DTDESLAQTN LTIALTAPSG NPNPFPGAVI  240
EERESGKTIS SLQQVSRSRH LLPKPPKAIL AAGLETNAGM VPQIRVARPP AEGRVKNQLL  300
PRYWPRITDQ ELQQISGDSN STIVPLFEKV LSASDAGRIG RLVLPKACAE AYFPPISQPE  360
GLPLRIQDVK GKEWVFQFRF WPNNNSRMYV LEGVTPCIQS MQLQAGDTVT FSRMDPEGKL  420
LMGFRKASNS IAMQSLKGST DPHLNALSKH LNSAGGDFSW HVMDKHGSDT KDGLLPQSML  480
VQERKRSRNI GSKSKRLLID SQDALELKLT WEEAQDMLRP PVSEKPSIVT IEDHEFEEYE  540
EPPVFGKRSI FVARLTGGQE QWTQCDSCSK WRRLPADILL PPKWTCSDNI LDQCRCSCSA  600
PDELSPRELE SLLRLNKDFK KRRMVTSHRL VQEHESAGLD ALANAAVLGD DATDPGAATV  660
ATTTKHPRHR PGCSCIVCIQ PPSGKGKHKP TCTCNVCMTV KRRFKTLMMR KKKRQSEREA  720
EIAQRNHYLW GTKDESEVDS TIRQVTSNRD SLDNKDILAQ SNNLSLKLPE IGKGGLDLNC  780
DPEHEEHLHQ GSTNVSMMSL LQVASLPLET YLKQNGLTSL VSEQQGSSGS HSLAQAAGES  840
EGRVQEDHCV APVVQELESR GDDLDQTRND PS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	701	712	KRRFKTLMMRKK
2	701	714	KRRFKTLMMRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein