PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028094829.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 908aa MW: 99544.2 Da PI: 6.5066

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028094829.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.8	1.9e-18	327	427	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ XP_028094829.1 327 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLRIQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PEGK 419 99************************555567778***********99899999999.*******************876.8888 PP .EEEEE-S CS B3 92 lvvkvfrk 99 l+++++++ XP_028094829.1 420 LLMGFRKA 427 88888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 908 aa Download sequence
MGSRACTNGL CGASSSNEWK KGWPLRSGEF ANLCDKCGSA YEQLVFCDTF HLKDTGWREC 60 SLCGKRLHCG CIASSSLLEL LDSGGVRCIG CTKSLGLQPA LNDEKPKGLS MSTTNNDGEM 120 RLTSVDNQMD GGNVDNMNLK QSDSNEELNG LKDLLPSHNN HANSGQIKEE EVLPAPGEVG 180 TMNSSNFNQA SVGSSETAKV DTYKTNMGIK DTDESLAQTN LTIALTAPSG NPNPFPGAVI 240 EERESGKTIS SLQQVSRSRH LLPKPPKAIL AAGLETNAGM VPQIRVARPP AEGRVKNQLL 300 PRYWPRITDQ ELQQISGDSN STIVPLFEKV LSASDAGRIG RLVLPKACAE AYFPPISQPE 360 GLPLRIQDVK GKEWVFQFRF WPNNNSRMYV LEGVTPCIQS MQLQAGDTVT FSRMDPEGKL 420 LMGFRKASNS IAMQATHLSA IPNGALSSEP FFSGVIENLS MTSGYSGLLQ SLKGSTDPHL 480 NALSKHLNSA GGDFSWHVMD KHGSDTKDGL LPQSMLVQER KRSRNIGSKS KRLLIDSQDA 540 LELKLTWEEA QDMLRPPVSE KPSIVTIEDH EFEEYEEPPV FGKRSIFVAR LTGGQEQWTQ 600 CDSCSKWRRL PADILLPPKW TCSDNILDQC RCSCSAPDEL SPRELESLLR LNKDFKKRRM 660 VTSHRLVQEH ESAGLDALAN AAVLGDDATD PGAATVATTT KHPRHRPGCS CIVCIQPPSG 720 KGKHKPTCTC NVCMTVKRRF KTLMMRKKKR QSEREAEIAQ RNHYLWGTKD ESEVDSTIRQ 780 VTSNRDSLDN KDILAQSNNL SLKLPEIGKG GLDLNCDPEH EEHLHQGSTN VSMMSLLQVA 840 SLPLETYLKQ NGLTSLVSEQ QGSSGSHSLA QAAGESEGRV QEDHCVAPVV QELESRGDDL 900 DQTRNDPS

Sequence ? help Back to Top

Protein Sequence Length: 908 aa Download sequence

MGSRACTNGL CGASSSNEWK KGWPLRSGEF ANLCDKCGSA YEQLVFCDTF HLKDTGWREC  60
SLCGKRLHCG CIASSSLLEL LDSGGVRCIG CTKSLGLQPA LNDEKPKGLS MSTTNNDGEM  120
RLTSVDNQMD GGNVDNMNLK QSDSNEELNG LKDLLPSHNN HANSGQIKEE EVLPAPGEVG  180
TMNSSNFNQA SVGSSETAKV DTYKTNMGIK DTDESLAQTN LTIALTAPSG NPNPFPGAVI  240
EERESGKTIS SLQQVSRSRH LLPKPPKAIL AAGLETNAGM VPQIRVARPP AEGRVKNQLL  300
PRYWPRITDQ ELQQISGDSN STIVPLFEKV LSASDAGRIG RLVLPKACAE AYFPPISQPE  360
GLPLRIQDVK GKEWVFQFRF WPNNNSRMYV LEGVTPCIQS MQLQAGDTVT FSRMDPEGKL  420
LMGFRKASNS IAMQATHLSA IPNGALSSEP FFSGVIENLS MTSGYSGLLQ SLKGSTDPHL  480
NALSKHLNSA GGDFSWHVMD KHGSDTKDGL LPQSMLVQER KRSRNIGSKS KRLLIDSQDA  540
LELKLTWEEA QDMLRPPVSE KPSIVTIEDH EFEEYEEPPV FGKRSIFVAR LTGGQEQWTQ  600
CDSCSKWRRL PADILLPPKW TCSDNILDQC RCSCSAPDEL SPRELESLLR LNKDFKKRRM  660
VTSHRLVQEH ESAGLDALAN AAVLGDDATD PGAATVATTT KHPRHRPGCS CIVCIQPPSG  720
KGKHKPTCTC NVCMTVKRRF KTLMMRKKKR QSEREAEIAQ RNHYLWGTKD ESEVDSTIRQ  780
VTSNRDSLDN KDILAQSNNL SLKLPEIGKG GLDLNCDPEH EEHLHQGSTN VSMMSLLQVA  840
SLPLETYLKQ NGLTSLVSEQ QGSSGSHSLA QAAGESEGRV QEDHCVAPVV QELESRGDDL  900
DQTRNDPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	737	748	KRRFKTLMMRKK
2	737	750	KRRFKTLMMRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein