PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028094656.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 847aa MW: 93431 Da PI: 6.0993 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.6 | 2.5e-19 | 17 | 75 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 k ++t+eq+e+Le++++++++ps ++r++L +++ +++ rq+kvWFqNrR +ek+ XP_028094656.1 17 KYVRYTPEQVEALERVYHECPKPSSNRRQQLIRECpilsNIEPRQIKVWFQNRRCREKQ 75 5679*****************************************************97 PP | |||||||
2 | START | 174.3 | 7.8e-55 | 161 | 369 | 2 | 205 |
HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS START 2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 +aee+++e+++ka+ ++ Wv+++ +++g++++ +++ s++++g a+ra+g+v +++ v+e+l+d++ W ++++++++l+vi + g+++l XP_028094656.1 161 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAVRACGLVGLEPT-RVAEILKDRPSWFRDCRAVDVLNVIPTTngGTIELL 254 789*******************************************************.8888888888***************87777****** PP EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS START 95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185 +++l+a+++l+p Rdf+ +Ry+ + +g +v++++S++++q+ p+ +++vRae+lpSg+li+++++g+s +++v+h++l++++++++lr+l+ XP_028094656.1 255 YMQLYAPTTLAPaRDFWLLRYTSVMDDGNLVVCERSLSNTQNGPSmppVQNFVRAEMLPSGYLIRSCEGGGSIIHIVDHMNLEAWSVPEVLRPLY 349 *******************************************9988899********************************************* PP HHHHHHHHHHHHHHTXXXXX CS START 186 ksglaegaktwvatlqrqce 205 +s+++ ++kt++ +l+++++ XP_028094656.1 350 ESSTVLAQKTTMMALRQLRQ 369 ***************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 847 aa Download sequence |
MITMSCKDGK GVMDNGKYVR YTPEQVEALE RVYHECPKPS SNRRQQLIRE CPILSNIEPR 60 QIKVWFQNRR CREKQRKESS RLQSVNRKLT AMNKLLMEEN DRLQKQVSHL VYENGYFRQH 120 TQNTTLVTKD GSCESVVTSG QQHLAPQHPP KDASPAGLLS IAEETLTEFL SKATGTAVEW 180 VQMPGMKPGP DSIGIVAISH GCTGVAVRAC GLVGLEPTRV AEILKDRPSW FRDCRAVDVL 240 NVIPTTNGGT IELLYMQLYA PTTLAPARDF WLLRYTSVMD DGNLVVCERS LSNTQNGPSM 300 PPVQNFVRAE MLPSGYLIRS CEGGGSIIHI VDHMNLEAWS VPEVLRPLYE SSTVLAQKTT 360 MMALRQLRQI AQEVSQSNVT NWSRRPAALR ALSQRLSRGF NEALNGFTDE GWSMMENDGM 420 DDVSILVNSS PDKLMGLNLT FSNGFPAVSN AVLCAKASML LQDLINDGSI LNVPPAILLR 480 FLREHRSEWA DSSIDAYSAA AVKVGPCILP RARAGSFGGQ VILPLAHTIE HEELLEVIKL 540 EGVGHYPEDA IMPRDMFLLQ LCSGMDENAV GTCAELIFAP IDASFADDAP LLPSGFRIIP 600 LDSGKEASSP NRTLDLASAL EIGPAGNKES NDCAGISGST RSVMTIAFEF VFESHMQENV 660 ASMARQYVRS IISSVQRVAL ALSPSHPNSH GGLRLPLGTP EANTLSQWIC HSYRCYLGVE 720 LLKSGIEGSE STLKTLWHHS DAIMCCSLKA LPVFTFANQA GLDMLETTLV ALQDITLEKI 780 LDDHGRKTLS SEFPQIMQQG FACLQGGICL SSMGRPVSYE RAVAWKVLNE EESVHCMCFM 840 FMNWSFV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G52150.1 | 0.0 | HD-ZIP family protein |