PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028094567.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

CAMTA

Protein Properties

Length: 926aa MW: 104699 Da PI: 6.8838

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028094567.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	161.2	1.9e-50	31	146	3	118
CG-1 3 kekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 + k+rwl+++ei+aiL n + +++ ++ + pksg+++L++rk++r+frkDGy+wkkkkdgktv+E+he+LKvg+ e +++yYah+e+n+tf rr XP_028094567.1 31 DAKTRWLRPNEIHAILCNPKYFSVNVKPVNLPKSGTIVLFDRKMLRNFRKDGYNWKKKKDGKTVKEAHEHLKVGNEEKIHVYYAHGEDNSTFVRR 125 4599***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 cywlL+++le+ivlvhy+e++ XP_028094567.1 126 CYWLLDKTLEHIVLVHYRETQ 146 ****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 926 aa Download sequence
MENTVSGRLV GWETHGFPTM EDLDVGSIME DAKTRWLRPN EIHAILCNPK YFSVNVKPVN 60 LPKSGTIVLF DRKMLRNFRK DGYNWKKKKD GKTVKEAHEH LKVGNEEKIH VYYAHGEDNS 120 TFVRRCYWLL DKTLEHIVLV HYRETQEGSP ATPVNSNSRS ALSDQSASWL LSEESDSGAD 180 PVYHAAEKAQ LGYEPGGSMT HKNHEMTLHE INTLEWEELL VLDDPSKLSA PDGGKTSCFE 240 QQNQYETNGL TTNGNIIPSA NKLPTENSFR SLSEPIARSN SIHFNILENL RLQMMESQTN 300 SNLQKKDYQL GTVGTGETLD IIGKDGLQTQ DSFGRWINYI MADSPGSVDD LEFSIQSSHE 360 SSTSPMMDHL QSSVPVQIFT ITDVSPGWAF STEETKILIT GFFNDPHLAK SDIYCVCGDA 420 CGPAEIVQSG VFRCLVSPHT PGSVNLYLSF DGHNPISQVL TFEYRAPLTG NWMISAEEMS 480 NWEKFRVQMR LAHLLFSTSK SLNFLSSKVS PDTLKEAKKF AHKTSHIADG WAYMIESIEN 540 NKISFQQAKD SLFELALKNR LYEWLLERVV EGCITSDRDE QGQGVIHLCS ILDYTWAVYP 600 FACSGLSLDY RDKFGWTALH WAAYCGREKM VAALLSAGAK PNLVTDPNSE NPGGCTAADL 660 ASIEGYDGLA AYLAEKGLVE HFKEMTIAGN VSGSLQTSTP DSVNLRNLSK EELYLKDTLA 720 AYRTAADAAA RIQAAFREHS FKLRAKAIEF SNPENEARSI IAAMKIQHAF RNYESRKTMA 780 AAARIQHRFR TWKTRREFLN MRCQVIKIQA VFRGFQVRKQ YRKITWSVGV LEKAILRWRM 840 KRRGFRGFQV LPAEAANDPM QESDVEEDFF RASRKQAEQR VERSVVRVQA MFRSKKAQQE 900 YQMMKLAHNQ ARLEYEGLVS PDIDMG

Sequence ? help Back to Top

Protein Sequence Length: 926 aa Download sequence

MENTVSGRLV GWETHGFPTM EDLDVGSIME DAKTRWLRPN EIHAILCNPK YFSVNVKPVN  60
LPKSGTIVLF DRKMLRNFRK DGYNWKKKKD GKTVKEAHEH LKVGNEEKIH VYYAHGEDNS  120
TFVRRCYWLL DKTLEHIVLV HYRETQEGSP ATPVNSNSRS ALSDQSASWL LSEESDSGAD  180
PVYHAAEKAQ LGYEPGGSMT HKNHEMTLHE INTLEWEELL VLDDPSKLSA PDGGKTSCFE  240
QQNQYETNGL TTNGNIIPSA NKLPTENSFR SLSEPIARSN SIHFNILENL RLQMMESQTN  300
SNLQKKDYQL GTVGTGETLD IIGKDGLQTQ DSFGRWINYI MADSPGSVDD LEFSIQSSHE  360
SSTSPMMDHL QSSVPVQIFT ITDVSPGWAF STEETKILIT GFFNDPHLAK SDIYCVCGDA  420
CGPAEIVQSG VFRCLVSPHT PGSVNLYLSF DGHNPISQVL TFEYRAPLTG NWMISAEEMS  480
NWEKFRVQMR LAHLLFSTSK SLNFLSSKVS PDTLKEAKKF AHKTSHIADG WAYMIESIEN  540
NKISFQQAKD SLFELALKNR LYEWLLERVV EGCITSDRDE QGQGVIHLCS ILDYTWAVYP  600
FACSGLSLDY RDKFGWTALH WAAYCGREKM VAALLSAGAK PNLVTDPNSE NPGGCTAADL  660
ASIEGYDGLA AYLAEKGLVE HFKEMTIAGN VSGSLQTSTP DSVNLRNLSK EELYLKDTLA  720
AYRTAADAAA RIQAAFREHS FKLRAKAIEF SNPENEARSI IAAMKIQHAF RNYESRKTMA  780
AAARIQHRFR TWKTRREFLN MRCQVIKIQA VFRGFQVRKQ YRKITWSVGV LEKAILRWRM  840
KRRGFRGFQV LPAEAANDPM QESDVEEDFF RASRKQAEQR VERSVVRVQA MFRSKKAQQE  900
YQMMKLAHNQ ARLEYEGLVS PDIDMG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein