PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028094353.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 433aa MW: 48408.7 Da PI: 9.2572

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028094353.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100	1.5e-31	155	212	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK vkg+ef rsYYrCt+++Cp+k++vers+ d+++++++Y g+H+h+k XP_028094353.1 155 GDGYNWRKYGQKLVKGNEFVRSYYRCTHPNCPAKRQVERSQ-DGQITDTVYLGKHDHPK 212 5**************************************.*************85 PP
2	WRKY	106.4	1.5e-33	329	387	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+vkg+++prsYYrC+ gCpvkk+ver+++dpk+v++tYeg+H+h+ XP_028094353.1 329 VNDGYRWRKYGQKMVKGNPNPRSYYRCSNGGCPVKKHVERASHDPKMVITTYEGQHDHD 387 58********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MGSDKSQKRK NPDSTSQSNQ EGNNLSVLPK QELGELQKSQ SPNAEVSVSQ CNEEGKTEKV 60 LENLQKRQST DSTSRVRTSH SLIPEKVSDN LQQKQSPDTG VCDSQPNQEK ISLSTIPEKV 120 PDSLQFTLSI NTGSHRLQRD QEGRTPPRIP DKALGDGYNW RKYGQKLVKG NEFVRSYYRC 180 THPNCPAKRQ VERSQDGQIT DTVYLGKHDH PKPQPGPPIA IGFVPPIQAK RQDERPLATV 240 EDKTSNAHGL KSHHAKPMET ARLPTNAVTD DAVESAISQR NRTREESDHR GDVDSKRQKR 300 DICSIDETLV DKPHGEPRVV QTRSEVDFVN DGYRWRKYGQ KMVKGNPNPR SYYRCSNGGC 360 PVKKHVERAS HDPKMVITTY EGQHDHDIPL ARTVTPNTAG TNTNIKALNG ESRSTPEEKN 420 TVGLEVAVHI SAK

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MGSDKSQKRK NPDSTSQSNQ EGNNLSVLPK QELGELQKSQ SPNAEVSVSQ CNEEGKTEKV  60
LENLQKRQST DSTSRVRTSH SLIPEKVSDN LQQKQSPDTG VCDSQPNQEK ISLSTIPEKV  120
PDSLQFTLSI NTGSHRLQRD QEGRTPPRIP DKALGDGYNW RKYGQKLVKG NEFVRSYYRC  180
THPNCPAKRQ VERSQDGQIT DTVYLGKHDH PKPQPGPPIA IGFVPPIQAK RQDERPLATV  240
EDKTSNAHGL KSHHAKPMET ARLPTNAVTD DAVESAISQR NRTREESDHR GDVDSKRQKR  300
DICSIDETLV DKPHGEPRVV QTRSEVDFVN DGYRWRKYGQ KMVKGNPNPR SYYRCSNGGC  360
PVKKHVERAS HDPKMVITTY EGQHDHDIPL ARTVTPNTAG TNTNIKALNG ESRSTPEEKN  420
TVGLEVAVHI SAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.1	7e-86	WRKY family protein