PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028094020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | WRKY | ||||||||
Protein Properties | Length: 255aa MW: 29081.8 Da PI: 4.8493 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98.1 | 5.7e-31 | 55 | 113 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs+fprsYYrC+++ gCp+kk+ver++++ ++++itY+++Hnh+ XP_028094020.1 55 SDCWSWRKYGQKPIKGSPFPRSYYRCSTSkGCPAKKQVERCKTEASMLIITYTSNHNHP 113 699***********************9988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MDGSHSQELD SNITIQLQPE TDQPSKRRKE NQKGVVTVKI EANDHRKQRS EGPPSDCWSW 60 RKYGQKPIKG SPFPRSYYRC STSKGCPAKK QVERCKTEAS MLIITYTSNH NHPGPDLHTT 120 TTTNLNKQSK QPKTQLTQDH EAQDDQEEQQ PFMNSDEDAN EDHFHYSQSP VSQSQNPFAE 180 TIEDTNDSPP SVLLDEEPLS YPLPLMTFPT IKSEENDFYD ELEELPISSS SSSLTSFLRS 240 NFFDERILVH PSCSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30650.1 | 2e-35 | WRKY family protein |