PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028093996.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 229aa MW: 24650.7 Da PI: 8.6849 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.1 | 8.1e-17 | 70 | 118 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++G+r ++ +g+Wv+eIr+p++ ++r++lg++ t+e+Aa+a++aa+++l+g XP_028093996.1 70 NFRGIR-CR-SGKWVSEIREPRK---TTRVWLGTYPTPEMAAAAYDAAALALKG 118 589**9.55.6*********843...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MANPDANVRQ NYQPPNSSLT LLTQLQQQPN NSPLRTTTTE DPSPKSPQPP FTATIASRSR 60 GGATSSKHPN FRGIRCRSGK WVSEIREPRK TTRVWLGTYP TPEMAAAAYD AAALALKGPN 120 SPLNFPKSLL SYPVAASSSA IDVRAAAAAA AAAAARLPRQ SGPVENTCQT RTDSGQAFFM 180 DDEEIFDMPN LLVDMAKGML MSPPRMMKPP PSDDDLPENS DGGSLWSYT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 5e-36 | ERF family protein |