PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028093800.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | SBP | ||||||||
Protein Properties | Length: 466aa MW: 51122 Da PI: 8.4255 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 131.2 | 3.6e-41 | 180 | 257 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+ dls+ak+yhr+h+vCe hsk+p+v+v gle+rfCqqCsrfh+lsefDe+krsCrrrL++hn+rrrk+q+ XP_028093800.1 180 RCQVEGCSLDLSSAKDYHRKHRVCESHSKCPKVVVGGLERRFCQQCSRFHSLSEFDEKKRSCRRRLSDHNARRRKPQQ 257 6**************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 466 aa Download sequence |
MNSLPAMDWN SKWDWENLVM FNSKSIESPK KQPTDWGIEE GEIDMVSFNL SGGGGGGSGS 60 ELAHGSSARS SISASTDSSS KEVMKASRNA FEVFHGFTGD FSKKNELARA ELAGTSPPLE 120 SSVGSGEPLI GLKLGKRTYF ENNCTGGNTK TSSFSAIPAS SAATTAKKIK SSCQSTPPPR 180 CQVEGCSLDL SSAKDYHRKH RVCESHSKCP KVVVGGLERR FCQQCSRFHS LSEFDEKKRS 240 CRRRLSDHNA RRRKPQQDVN QFNSTRLPSS FLDGRQQMSF VLNNAPLVHT RSSANPTWES 300 TCNPKFTLTE GYLLKSEKNG GIDGQLQLRG TELPHAISMH GQNSNRLFPS KGSKAEIFTQ 360 GLSSNLDAAP DHRALSLLST NSWGSEPANI ALDHPIHVNL TTMPQPMIHG VPQGLPLSSS 420 DYWQTEQHST DPRHIHPLTT NDGSQFHEIQ LLKSPYESAL YPNLMN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 237 | 254 | KKRSCRRRLSDHNARRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43270.1 | 8e-68 | SBP family protein |