PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028093788.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family SBP
Protein Properties Length: 466aa    MW: 51122 Da    PI: 8.4255
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028093788.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP131.23.6e-41180257178
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     +CqvegC+ dls+ak+yhr+h+vCe hsk+p+v+v gle+rfCqqCsrfh+lsefDe+krsCrrrL++hn+rrrk+q+
  XP_028093788.1 180 RCQVEGCSLDLSSAKDYHRKHRVCESHSKCPKVVVGGLERRFCQQCSRFHSLSEFDEKKRSCRRRLSDHNARRRKPQQ 257
                     6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    
MNSLPAMDWN SKWDWENLVM FNSKSIESPK KQPTDWGIEE GEIDMVSFNL SGGGGGGSGS  60
ELAHGSSARS SISASTDSSS KEVMKASRNA FEVFHGFTGD FSKKNELARA ELAGTSPPLE  120
SSVGSGEPLI GLKLGKRTYF ENNCTGGNTK TSSFSAIPAS SAATTAKKIK SSCQSTPPPR  180
CQVEGCSLDL SSAKDYHRKH RVCESHSKCP KVVVGGLERR FCQQCSRFHS LSEFDEKKRS  240
CRRRLSDHNA RRRKPQQDVN QFNSTRLPSS FLDGRQQMSF VLNNAPLVHT RSSANPTWES  300
TCNPKFTLTE GYLLKSEKNG GIDGQLQLRG TELPHAISMH GQNSNRLFPS KGSKAEIFTQ  360
GLSSNLDAAP DHRALSLLST NSWGSEPANI ALDHPIHVNL TTMPQPMIHG VPQGLPLSSS  420
DYWQTEQHST DPRHIHPLTT NDGSQFHEIQ LLKSPYESAL YPNLMN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1237254KKRSCRRRLSDHNARRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43270.18e-68SBP family protein