PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028093665.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 208aa MW: 23703.4 Da PI: 9.8113 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 81.8 | 4.3e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+ks rqvtfskRr g+ KKA LSvLCd++va+++fss+gkly ++s XP_028093665.1 9 KRIESKSSRQVTFSKRRGGLVKKARDLSVLCDVDVALLVFSSRGKLYQFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 54.9 | 3.7e-19 | 93 | 170 | 22 | 99 |
K-box 22 akLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 a + e Lq ++Rhl +++Ls+ +L qLe++ + +l++i+s+K+ l++e+i l +ke+ lqeenk L ++++ XP_028093665.1 93 ASFRTISELLQITKRHLEEPYVDQLSVTDLIQLEKEFDAALTQIKSRKTLLMMESIMALHEKERILQEENKLLANQIA 170 566777899*****************************************************************9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MGRKKVEMKR IESKSSRQVT FSKRRGGLVK KARDLSVLCD VDVALLVFSS RGKLYQFCSA 60 NNSMAKILKQ YHHHSGAKGR FSTGDCEAES RFASFRTISE LLQITKRHLE EPYVDQLSVT 120 DLIQLEKEFD AALTQIKSRK TLLMMESIMA LHEKERILQE ENKLLANQIA AMETNGNKVE 180 NKVVMASNDD LGNKYMNCHS QQPILHLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65050.2 | 1e-46 | MIKC_MADS family protein |