PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028093640.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family WRKY
Protein Properties Length: 186aa    MW: 21087.5 Da    PI: 9.6582
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028093640.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.46.3e-33107165159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ +v++tYeg H h+
  XP_028093640.1 107 LDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLSKDEGIVVTTYEGMHSHS 165
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MDNYSSIFSC SSSSTSSASH LSLNMVNSQA YHEFQGDKAN GFLGLMTNMG VPNSEANNNN  60
GGVSQSKSFV VGTEINDEMK SSEKKKGEKK IRKPRFAFQT RSHVDILDDG YRWRKYGQKA  120
VKNNKFPRSY YRCTHQGCNV KKQVQRLSKD EGIVVTTYEG MHSHSIEKST DNFEHILNQM  180
QIYTAF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.19e-57WRKY family protein