PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028093634.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | AP2 | ||||||||
Protein Properties | Length: 121aa MW: 14135.7 Da PI: 11.4155 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 23.3 | 1.6e-07 | 71 | 101 | 1 | 29 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krk 29 s y+GV++++++gr++A+++d s+n ++k XP_028093634.1 71 SIYRGVTRHRWTGRFEAHLWDkSSWNSiQNK 101 57*******************7777877443 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence |
MKRSPSSCWS SSSTSSVESD LHPAHHHDDQ SAQRKPKAKR PRSRPRGAIN KNLNQSTSQK 60 IINPNSPRRS SIYRGVTRHR WTGRFEAHLW DKSSWNSIQN KKGRQSEYLY LYLYHQSSIF 120 N |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 33 | 40 | QRKPKAKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.3 | 3e-23 | AP2 family protein |