PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028093467.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | B3 | ||||||||
Protein Properties | Length: 219aa MW: 25012.1 Da PI: 9.693 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 102.5 | 2.4e-32 | 107 | 206 | 1 | 96 |
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k+ tpsdv+k++rlv+pk++ae+h ++ + +++ l ++d g++W+++++y+++s++yvltkGW++Fvk++ Lk+gD+v F+++ s+ + XP_028093467.1 107 FEKAVTPSDVGKLNRLVIPKQHAEKHfplqSETTSKGVLLNFKDVAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKSLKAGDIVSFYRSTGSDNQ 201 89*************************9986677799**************************************************88668888 PP .EEEE CS B3 92 lvvkv 96 l++ + XP_028093467.1 202 LFIDW 206 88877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MAKELRYRPS NNYYSKVSGY SGLELLKSDV DVLMLGTYVD ENRVIDVYIG HNLDDNSVIH 60 TYNDELEQSR KNYIGGFINN NGNKKACCNE KSTTNYKNNV KATEQLFEKA VTPSDVGKLN 120 RLVIPKQHAE KHFPLQSETT SKGVLLNFKD VAGKVWRFRY SYWNSSQSYV LTKGWSRFVK 180 EKSLKAGDIV SFYRSTGSDN QLFIDWKPRN GSNPVVQPG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13260.1 | 3e-64 | RAV family protein |