PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028093247.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 737aa MW: 85378.9 Da PI: 7.8102

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028093247.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.8	6.8e-27	36	124	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYneY++ vGFs+r+++ +ks+++g +t+r+fvC keg+re++k+ + +++r+etrt+Cka ++++ ++ +kw v+k++++HnH+l XP_028093247.1 36 EFYNEYGRIVGFSIRRDYCTKSQKDGVMTSRKFVCCKEGEREKDKRY-TMIKNPRSETRTNCKAFMHISFKRdLSKWIVSKFDSNHNHPL 124 6*****************************************999.99***************999799***********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 737 aa Download sequence
MDDGGLEGCI EEMRELAKDK SPYLGMEFPS EEAAYEFYNE YGRIVGFSIR RDYCTKSQKD 60 GVMTSRKFVC CKEGEREKDK RYTMIKNPRS ETRTNCKAFM HISFKRDLSK WIVSKFDSNH 120 NHPLHLPQCT HLMPSQRKVC DAQGINIDIA DENGISLKAS HDLISAIAGG KEFVGFTRED 180 QKTYLRVKRQ RNLQYGEAGS LLRYFQQQVA ENPYFYYAIQ LDADEMITNI FWADHQMITN 240 YGLFGDAVSF DTTFRTNKEY RPLALFCGFN HFRMTVIFGV ALLHDETAES FEWLFETFLD 300 AMSGKKPVSF FTDQDQAMAK AISQIMPEVF HGLCTFHLMQ NALKHLGYLF KSGSKFSSDL 360 KACIYDYENE HELIEAWNSL IDKYNLQENE WMKRTWRKRE QWAHVYMKWV FTGGMRSTQL 420 SESLNGTLRG YLKGDHNIVQ FFTHFNRIVV DKWYEEISAI YDSRQKLPRM KLKKCPILIQ 480 VASLYTPPIF DLFHCELDTS LCCQVKQFHE LEGEVKCVIG LYGNGKEYIV EGRVEVIGLR 540 GEKSCQEIHC TCKKFENFGI LCSHAIKALD RMNVMKIPER YILGRWRLDA KDFEVEEKNV 600 VMDEDDPKLL ILACYRDLCP RMVKLATQAS MHKPAYQLVD EEIKELCVKV NNMMKGVGSF 660 GTNELDVDDP NIAQVKGIKK KDVGHKGRGR LKPLHEMMNK KTKVISQPTR LSKTIGQSSN 720 TTNIQNSSSS QPQFSYY

Sequence ? help Back to Top

Protein Sequence Length: 737 aa Download sequence

MDDGGLEGCI EEMRELAKDK SPYLGMEFPS EEAAYEFYNE YGRIVGFSIR RDYCTKSQKD  60
GVMTSRKFVC CKEGEREKDK RYTMIKNPRS ETRTNCKAFM HISFKRDLSK WIVSKFDSNH  120
NHPLHLPQCT HLMPSQRKVC DAQGINIDIA DENGISLKAS HDLISAIAGG KEFVGFTRED  180
QKTYLRVKRQ RNLQYGEAGS LLRYFQQQVA ENPYFYYAIQ LDADEMITNI FWADHQMITN  240
YGLFGDAVSF DTTFRTNKEY RPLALFCGFN HFRMTVIFGV ALLHDETAES FEWLFETFLD  300
AMSGKKPVSF FTDQDQAMAK AISQIMPEVF HGLCTFHLMQ NALKHLGYLF KSGSKFSSDL  360
KACIYDYENE HELIEAWNSL IDKYNLQENE WMKRTWRKRE QWAHVYMKWV FTGGMRSTQL  420
SESLNGTLRG YLKGDHNIVQ FFTHFNRIVV DKWYEEISAI YDSRQKLPRM KLKKCPILIQ  480
VASLYTPPIF DLFHCELDTS LCCQVKQFHE LEGEVKCVIG LYGNGKEYIV EGRVEVIGLR  540
GEKSCQEIHC TCKKFENFGI LCSHAIKALD RMNVMKIPER YILGRWRLDA KDFEVEEKNV  600
VMDEDDPKLL ILACYRDLCP RMVKLATQAS MHKPAYQLVD EEIKELCVKV NNMMKGVGSF  660
GTNELDVDDP NIAQVKGIKK KDVGHKGRGR LKPLHEMMNK KTKVISQPTR LSKTIGQSSN  720
TTNIQNSSSS QPQFSYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-115	FAR1 family protein