PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028093118.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 352aa MW: 40062.8 Da PI: 5.4827

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028093118.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70	5.6e-22	92	185	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYneYAk GFs+r+s+ +++k+ + +++r + Cs+eg+r ++ + +ek+r ++a tr+gCka+++++ + gk++vt+++ +HnHela XP_028093118.1 92 FYNEYAKAKGFSIRNSRFNTNKERK-VVSRLWLCSREGQRLPKYLDcvAEKSRAPKALTRVGCKAQFRIRYDAnageGGKYVVTQFVADHNHELA 185 ***************99996665.999999******99988899999************9987667789************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MAPAEVKREC DDYDIPNEAD DIRLMNESRV ESYHGCEAGP SNEEATNMNV EDGGADAQKE 60 MVDDAHCNDM VGDVERVSLE QKFDSVEDGE AFYNEYAKAK GFSIRNSRFN TNKERKVVSR 120 LWLCSREGQR LPKYLDCVAE KSRAPKALTR VGCKAQFRIR YDANAGEGGK YVVTQFVADH 180 NHELAEQHCV MYLRSHRSLN SADKVQAMVM RNVSMKTSQI MDYMVNQSGS YENVGFIRTD 240 LHNHIQAERR AEVEDGDAQG ALVYLCAKLD VNARFFYKYD VCNDNKLQNL FWADSKSRAD 300 YAKFGDVLIF DSTYRTNAYK KPFVILASVT SHFRTTIFAC VLLANETTET YT

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MAPAEVKREC DDYDIPNEAD DIRLMNESRV ESYHGCEAGP SNEEATNMNV EDGGADAQKE  60
MVDDAHCNDM VGDVERVSLE QKFDSVEDGE AFYNEYAKAK GFSIRNSRFN TNKERKVVSR  120
LWLCSREGQR LPKYLDCVAE KSRAPKALTR VGCKAQFRIR YDANAGEGGK YVVTQFVADH  180
NHELAEQHCV MYLRSHRSLN SADKVQAMVM RNVSMKTSQI MDYMVNQSGS YENVGFIRTD  240
LHNHIQAERR AEVEDGDAQG ALVYLCAKLD VNARFFYKYD VCNDNKLQNL FWADSKSRAD  300
YAKFGDVLIF DSTYRTNAYK KPFVILASVT SHFRTTIFAC VLLANETTET YT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-46	FAR1 family protein