PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028093060.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 321aa    MW: 34420.1 Da    PI: 4.9886
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028093060.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.84.6e-16223259135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg ++  Tp++Rrgp g++tLCnaCGl+++ kg+
  XP_028093060.1 223 CTHCGISSksTPMMRRGPAGPRTLCNACGLKWANKGV 259
                     *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MPETNHEASM YVAEAMNMQQ QQQQNQIEDE EDDEVAGGES IDNPQIRFEA HAALHDGGGG  60
PVMNGVDGVH PHALYVPGSE IPPAVGGGGA DQLTLSFQGE VYVFDAVSPE KVQAVLLLLG  120
GYEVPTGIPT VGVAPQNQRG LADFPGRSSQ PQRAASLNRF REKRKERCFD KKIRYNVRKE  180
VALRMQRRKG QFTSSKTISD EVGASSDWNA SQGSGQEEQE TLCTHCGISS KSTPMMRRGP  240
AGPRTLCNAC GLKWANKGVL RDLSKVSAAG IQDPTVKAAE QSEGEANDSD VVTSAADIIN  300
SSNGENSAVP AERTCRTNLP Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.24e-84GATA family protein