PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028092969.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 550aa MW: 64268.2 Da PI: 7.9962

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028092969.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.8	6.7e-22	65	155	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 fYn+YAk +GFsvr+s+++ s +n+ + +r++vC +eg +e++ + e+ r++raetr C+a+++v+ +k k++vt+++ eHnH+la XP_028092969.1 65 FYNAYAKVIGFSVRRSRKRISGDNKFVESRKWVCPREGVSEKKYLQrVERVRTPRAETRLFCNATFRVRYDKtARKYVVTHFVGEHNHPLA 155 *************************************999987746777889*************999*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MDEPESSRPE EVNTEIDDQF ALDGKDDVVD VKEGLASQTY DSLRMLTKED VLQMKFNSED 60 DAYTFYNAYA KVIGFSVRRS RKRISGDNKF VESRKWVCPR EGVSEKKYLQ RVERVRTPRA 120 ETRLFCNATF RVRYDKTARK YVVTHFVGEH NHPLAAPHCV PFLWSHRFVT SADQAQAKAM 180 RNVGMKTGQI MDFMVHQSGG YEKVGFIHRD LHNQFQAERK VQLAEGDAEG ALGYLSAKLD 240 ADPLFFFKYN VDKDNRLDKI FWADCRSRMD YAAFGDVLVF DTTYRTNAYK KPFVILAGVS 300 NHFMTTIFGC ALLPDETMET YTWVLEMLME AMDGKRPISV VTDGDRAMRQ AIKRVIPNCR 360 HRLCSWHLEK NASTNVHIPE FTTDFAQLML KKCKIDEFDN AWAAMVKQYK LENNNWVSDI 420 HLKHDNWAEA YLRGHMFAGM RSTQRVEGIN AYFNIFLNQK VRLYEFVAQY DRALTRMRVN 480 EAETESKTEN SFPVLTTPLR SLEKHAAELF TRKIFSLFQH EIRKEGKLFV MERVQLEDHR 540 TYCFEMDKTW

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MDEPESSRPE EVNTEIDDQF ALDGKDDVVD VKEGLASQTY DSLRMLTKED VLQMKFNSED  60
DAYTFYNAYA KVIGFSVRRS RKRISGDNKF VESRKWVCPR EGVSEKKYLQ RVERVRTPRA  120
ETRLFCNATF RVRYDKTARK YVVTHFVGEH NHPLAAPHCV PFLWSHRFVT SADQAQAKAM  180
RNVGMKTGQI MDFMVHQSGG YEKVGFIHRD LHNQFQAERK VQLAEGDAEG ALGYLSAKLD  240
ADPLFFFKYN VDKDNRLDKI FWADCRSRMD YAAFGDVLVF DTTYRTNAYK KPFVILAGVS  300
NHFMTTIFGC ALLPDETMET YTWVLEMLME AMDGKRPISV VTDGDRAMRQ AIKRVIPNCR  360
HRLCSWHLEK NASTNVHIPE FTTDFAQLML KKCKIDEFDN AWAAMVKQYK LENNNWVSDI  420
HLKHDNWAEA YLRGHMFAGM RSTQRVEGIN AYFNIFLNQK VRLYEFVAQY DRALTRMRVN  480
EAETESKTEN SFPVLTTPLR SLEKHAAELF TRKIFSLFQH EIRKEGKLFV MERVQLEDHR  540
TYCFEMDKTW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-96	FAR1 family protein