PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028092942.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 242aa    MW: 26738.6 Da    PI: 5.4975
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028092942.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2130.0003197119123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_028092942.1  97 FPCNYCQRKFFSSQALGGHQNAH 119
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MKSRAFDLEV ETFDENDSDI SSQVASNITI SDSLTVSPHL TNSLPTEPIS LDLTLSFNSS  60
NDDLAGRDSI GISISSTSES SNEIVSRTAA SALPRVFPCN YCQRKFFSSQ ALGGHQNAHK  120
RERTLAKQAM RMGIFSERYA SLASLPLHGS SSFRSLGIKA HSSVHHSFVP QVRPFDFRSS  180
VRFEQGHTGH PIFMEDEEAG LLWPGSFRHI DEEQVTHPNI NFFEASPSVD IDEPAPDLTL  240
RL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.12e-46C2H2 family protein