PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028092789.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

SBP

Protein Properties

Length: 552aa MW: 60223.5 Da PI: 7.0424

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028092789.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.4	3.1e-41	177	252	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv gC++dls+ k+yh+rhkvCevhsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk++ XP_028092789.1 177 CQVYGCKKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLVEFDDGKRSCRKRLAGHNERRRKPH 252 **************************************************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MESWSYVSEG KGFVSDESIS ATDVIGRGKN GLMGWELKTP CSYDNNMVVT TSEGGIENQG 60 FVELGFPETM RKSRPLNNSV KDVSGCRFFG EGMCTPITST TNAFSGEDES SSKFSSSVVE 120 SNSRDSSLID LKLGRLGDHR DPQNFKSSKA APMLSSAESS TPAKRVRAGT STHTPFCQVY 180 GCKKDLSSSK DYHKRHKVCE VHSKTAKVIV NGIEQRFCQQ CSRFHLLVEF DDGKRSCRKR 240 LAGHNERRRK PHVHSGRTGR LFPSYIGNRF QGSTLTTSSF ICQDILPGNI LHPQKYDTND 300 WNRHIKNEDG ADYCPQSEIP ITTNGHLHPK SPFPYEFEKN FPSFHANGVN SAPGRDFNEN 360 SNRNPLDLGA PNSGSGSLIQ NTSLGNEDFI LFDSASTVQG LSGMLAPGRA LSLLSSQSQN 420 SSSHSSGIPM TQPPNVSGSH AHYTQVSGKL FGMSPQASTS GVSHKFNSTG MNSAEGNQFD 480 PMLISDDGDA VNFADGNFQG SRYMDGTDCL SCDDGPTVDL LQLSSQLQRV EHERQSTQVK 540 HEGDAFCGLK IT

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MESWSYVSEG KGFVSDESIS ATDVIGRGKN GLMGWELKTP CSYDNNMVVT TSEGGIENQG  60
FVELGFPETM RKSRPLNNSV KDVSGCRFFG EGMCTPITST TNAFSGEDES SSKFSSSVVE  120
SNSRDSSLID LKLGRLGDHR DPQNFKSSKA APMLSSAESS TPAKRVRAGT STHTPFCQVY  180
GCKKDLSSSK DYHKRHKVCE VHSKTAKVIV NGIEQRFCQQ CSRFHLLVEF DDGKRSCRKR  240
LAGHNERRRK PHVHSGRTGR LFPSYIGNRF QGSTLTTSSF ICQDILPGNI LHPQKYDTND  300
WNRHIKNEDG ADYCPQSEIP ITTNGHLHPK SPFPYEFEKN FPSFHANGVN SAPGRDFNEN  360
SNRNPLDLGA PNSGSGSLIQ NTSLGNEDFI LFDSASTVQG LSGMLAPGRA LSLLSSQSQN  420
SSSHSSGIPM TQPPNVSGSH AHYTQVSGKL FGMSPQASTS GVSHKFNSTG MNSAEGNQFD  480
PMLISDDGDA VNFADGNFQG SRYMDGTDCL SCDDGPTVDL LQLSSQLQRV EHERQSTQVK  540
HEGDAFCGLK IT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	3e-48	SBP family protein