PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028092726.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GRAS | ||||||||
Protein Properties | Length: 211aa MW: 23900.5 Da PI: 8.9463 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 203 | 1.8e-62 | 5 | 211 | 2 | 210 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 ++lL++c +av+ d + +++ L+r+++++s +gd ++Rla+yf++AL+arla++++ ly + ps+t + + +++l++++++++++P+ k+s+l XP_028092726.1 5 QTLLTQCSQAVARADVRSVNEQLNRIRQHSSAQGDGIERLAHYFANALEARLAGTGTALY--V-PSSTMRISAADVLKSYETYVKACPFNKMSNL 96 689***************************************************888888..3.3344446699********************* PP GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189 aN+ I++ +++++++Hii f+i +G+QW++L++ L++Rp+gpp+lRiTg++ p++g +e++e+tg+rL+ ++++++v+fe+++ +ak++e++ XP_028092726.1 97 YANRSIMKLAQTATTLHIIHFGILYGFQWACLIHHLSARPGGPPKLRITGIDFPQPGfhPAERVEQTGRRLETYCKRFNVQFEYTA-IAKKWETI 190 ********************************************************999***************************.7******* PP GRAS 190 eleeLrvkpgEalaVnlvlql 210 el+eL+++++E+l+Vn+ l+l XP_028092726.1 191 ELDELKIDRDEVLVVNCLLRL 211 *****************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MFDLQTLLTQ CSQAVARADV RSVNEQLNRI RQHSSAQGDG IERLAHYFAN ALEARLAGTG 60 TALYVPSSTM RISAADVLKS YETYVKACPF NKMSNLYANR SIMKLAQTAT TLHIIHFGIL 120 YGFQWACLIH HLSARPGGPP KLRITGIDFP QPGFHPAERV EQTGRRLETY CKRFNVQFEY 180 TAIAKKWETI ELDELKIDRD EVLVVNCLLR L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07530.1 | 4e-86 | GRAS family protein |