PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028092438.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 280aa    MW: 32256.1 Da    PI: 9.4386
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028092438.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR148.92.1e-154702690
            FAR1 26 geitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90
                    +++ +r++vCs++g+r++++ +  +++r +ra tr+gC+a+++++ +   gk+ vt+++ eHnH+la
  XP_028092438.1  4 TKVLSRKWVCSRQGQRAKQHLArIDRKRASRALTRVGCDAHFRIRYNLdVGKYIVTHFNMEHNHPLA 70
                    67999************999885788999*****************9989***************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MQATKVLSRK WVCSRQGQRA KQHLARIDRK RASRALTRVG CDAHFRIRYN LDVGKYIVTH  60
FNMEHNHPLA TSPCVPFLRS HRFVKILDKA QVKTLHDVGV KTSQIMDLLV QQSGSFANVG  120
FIHKDLHNYI QAERKVEMKD GDAECALAYL CVKADADPYF FYKYDKDQEN RLDKLFWADS  180
RSRLDYAAFG DVLVFDTTYT MNAYNKPFVI FAGVNNHFET TIFACSLLVD ETIATYTRVL  240
QKLLEAMDNK RPVSMLTDGD MAMREAIQKV FPSAKHRLCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-57FAR1 family protein