PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028092097.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 346aa    MW: 39814.9 Da    PI: 9.0769
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028092097.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS293.46e-90733939374
            GRAS  39 qRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLa 133
                     +Rla+y+++AL+arla+++  + +    ++ s    +++l+a+++f  +sP+ k+s++  N+ Il+ +e+++++HiiDf+i++G+QWp+L+q L+
  XP_028092097.1   7 ERLAHYIANALEARLAGTGRAVNAPHLIKRLS---AADTLKAYEAFLTASPFQKVSFFFGNKLILKLAEKATQIHIIDFGITHGFQWPNLIQHLS 98 
                     8****************777777665666555...9*********************************************************** PP

            GRAS 134 sRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserde 226
                      Rp+gpp++RiTg++ p++g   +e+ eetg+ La ++e+++vpfe+n  vak+++++++e+L++k++E+laVn+ + l  +lde+ + +  rd+
  XP_028092097.1  99 RRPGGPPRVRITGIDFPQAGfrPEERAEETGRLLAYYCEKFNVPFEYNS-VAKKWDTIRVEDLKIKRDEVLAVNCLYWLRCVLDETIEGSP-RDA 191
                     *******************9*****************************.7********************************88887776.*** PP

            GRAS 227 vLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerlee 321
                     vL+l+k+++P+++++   +  ++++ F++rf e l    ++fd+++a lpr+++ r+ +Ere+lg   ++v+aceg+er+ r et+++W+ r ++
  XP_028092097.1 192 VLNLIKRTNPDLFIHGIVNGTYSAPFFVTRFREVLFQAYSMFDMFDAVLPRDNQGRMLYEREVLGGGTMSVIACEGTERVVRPETYKQWQIRNTK 286
                     *********************************************************************************************** PP

            GRAS 322 aGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     aG++++pl+ ++++++++ +r  + + + ++ + +++++gWk+r   ++S+W+
  XP_028092097.1 287 AGLRQLPLDPEIMEDVRAKVRLGYHKDFVLDVDGNWMLQGWKGRISSAISCWK 339
                     ***********************9888*************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MGDWWWERLA HYIANALEAR LAGTGRAVNA PHLIKRLSAA DTLKAYEAFL TASPFQKVSF  60
FFGNKLILKL AEKATQIHII DFGITHGFQW PNLIQHLSRR PGGPPRVRIT GIDFPQAGFR  120
PEERAEETGR LLAYYCEKFN VPFEYNSVAK KWDTIRVEDL KIKRDEVLAV NCLYWLRCVL  180
DETIEGSPRD AVLNLIKRTN PDLFIHGIVN GTYSAPFFVT RFREVLFQAY SMFDMFDAVL  240
PRDNQGRMLY EREVLGGGTM SVIACEGTER VVRPETYKQW QIRNTKAGLR QLPLDPEIME  300
DVRAKVRLGY HKDFVLDVDG NWMLQGWKGR ISSAISCWKP AQEIKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-137GRAS family protein