PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028092097.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GRAS | ||||||||
Protein Properties | Length: 346aa MW: 39814.9 Da PI: 9.0769 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 293.4 | 6e-90 | 7 | 339 | 39 | 374 |
GRAS 39 qRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLa 133 +Rla+y+++AL+arla+++ + + ++ s +++l+a+++f +sP+ k+s++ N+ Il+ +e+++++HiiDf+i++G+QWp+L+q L+ XP_028092097.1 7 ERLAHYIANALEARLAGTGRAVNAPHLIKRLS---AADTLKAYEAFLTASPFQKVSFFFGNKLILKLAEKATQIHIIDFGITHGFQWPNLIQHLS 98 8****************777777665666555...9*********************************************************** PP GRAS 134 sRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserde 226 Rp+gpp++RiTg++ p++g +e+ eetg+ La ++e+++vpfe+n vak+++++++e+L++k++E+laVn+ + l +lde+ + + rd+ XP_028092097.1 99 RRPGGPPRVRITGIDFPQAGfrPEERAEETGRLLAYYCEKFNVPFEYNS-VAKKWDTIRVEDLKIKRDEVLAVNCLYWLRCVLDETIEGSP-RDA 191 *******************9*****************************.7********************************88887776.*** PP GRAS 227 vLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerlee 321 vL+l+k+++P+++++ + ++++ F++rf e l ++fd+++a lpr+++ r+ +Ere+lg ++v+aceg+er+ r et+++W+ r ++ XP_028092097.1 192 VLNLIKRTNPDLFIHGIVNGTYSAPFFVTRFREVLFQAYSMFDMFDAVLPRDNQGRMLYEREVLGGGTMSVIACEGTERVVRPETYKQWQIRNTK 286 *********************************************************************************************** PP GRAS 322 aGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 aG++++pl+ ++++++++ +r + + + ++ + +++++gWk+r ++S+W+ XP_028092097.1 287 AGLRQLPLDPEIMEDVRAKVRLGYHKDFVLDVDGNWMLQGWKGRISSAISCWK 339 ***********************9888*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 346 aa Download sequence |
MGDWWWERLA HYIANALEAR LAGTGRAVNA PHLIKRLSAA DTLKAYEAFL TASPFQKVSF 60 FFGNKLILKL AEKATQIHII DFGITHGFQW PNLIQHLSRR PGGPPRVRIT GIDFPQAGFR 120 PEERAEETGR LLAYYCEKFN VPFEYNSVAK KWDTIRVEDL KIKRDEVLAV NCLYWLRCVL 180 DETIEGSPRD AVLNLIKRTN PDLFIHGIVN GTYSAPFFVT RFREVLFQAY SMFDMFDAVL 240 PRDNQGRMLY EREVLGGGTM SVIACEGTER VVRPETYKQW QIRNTKAGLR QLPLDPEIME 300 DVRAKVRLGY HKDFVLDVDG NWMLQGWKGR ISSAISCWKP AQEIKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07530.1 | 1e-137 | GRAS family protein |