PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028092033.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 264aa MW: 29048.8 Da PI: 8.7415

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028092033.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.2	1.3e-12	77	124	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++h+e+ErrRR+riN + +Lr l+P K++Ka+ L ++v ++k+L+ XP_028092033.1 77 KSHSEAERRRRERINAHLTTLRGLVPCT-----DKMDKAALLAEVVSHVKQLK 124 58***********************7.....6***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MTSYAWKSNT LNSNFGPNCL FSENLGGFSG NWRGGSMSVS QSLVLDSERG ELVKAAPVRV 60 GKKNGGVSEE KAMAALKSHS EAERRRRERI NAHLTTLRGL VPCTDKMDKA ALLAEVVSHV 120 KQLKKTATET SKDLLVPMDT DEVRVESHNE GDTEETFSFR ASICCEYTPE LLSELRQVLN 180 SLHLNMVNAE ISTLGSRVKV FVFTSKKSMN ADNPEACQVI VNSIHRALST ILDKVSASAE 240 YSPRTTLPNK RQRISFFNSS SSSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	83	88	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	1e-30	bHLH family protein