PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028092029.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HSF | ||||||||
Protein Properties | Length: 215aa MW: 24948.2 Da PI: 9.6537 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 97.8 | 1.1e-30 | 31 | 141 | 2 | 102 |
HHHHHHHHHCTG...................GGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTT CS HSF_DNA-bind 2 Flkklyeilede...................elkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskek 77 Fl+k+y++le+e +++++w+ +g+ fvv+ + ef++ +Lp+yFkh+nf+SF+RQLn+YgFkk+ +++ XP_028092029.1 31 FLSKTYDLLEEEeaervrrrseahgggdgsgGGRRVVTWNGEGTGFVVWSPAEFSELMLPRYFKHNNFSSFIRQLNTYGFKKTASKR-------- 117 999******9777888888888888888888999*************************************************9988........ PP SEEEEESXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 78 iweFkhksFkkgkkellekikrkks 102 weF+h++F++g+++ll +i rkk XP_028092029.1 118 -WEFQHEKFQRGRRDLLVEISRKKG 141 .*********************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MATDFPDRQV GRKVGQPLPT PPPRTKCPAP FLSKTYDLLE EEEAERVRRR SEAHGGGDGS 60 GGGRRVVTWN GEGTGFVVWS PAEFSELMLP RYFKHNNFSS FIRQLNTYGF KKTASKRWEF 120 QHEKFQRGRR DLLVEISRKK GEPSAFPAYL RAAGENENAE EENNRLLLME ENKNLRKERI 180 ELELQIEHFK ALQTHLFECL SHYINNPQAK VRRLC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36990.1 | 5e-31 | HSF family protein |