PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028091823.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 756aa MW: 86351.9 Da PI: 7.7947

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028091823.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84	2.4e-26	25	114	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+++ kk+k +++i++r++vC+keg+r+ +k++ ++++raetrtgC+a+l vk++ +gk++v++++++HnHel+ XP_028091823.1 25 DFYNAYGGRMGFSIRREYCKKNKLTKQIISRNLVCNKEGFRKVDKRD-PLTKTPRAETRTGCEARLFVKLDVnSGKFVVIDFKEKHNHELV 114 6*****************************************999.9999***************99**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 756 aa Download sequence
MEPDNDCGWK PKVGMTFDSE ESAYDFYNAY GGRMGFSIRR EYCKKNKLTK QIISRNLVCN 60 KEGFRKVDKR DPLTKTPRAE TRTGCEARLF VKLDVNSGKF VVIDFKEKHN HELVSLDCAH 120 MLPSQRKISD TQAIELDLAS ESGLRLGQSF ELMGREAGGR QSLDNEEQIT NMFWADAQMV 180 MDYAQFGDVV TFDTTYKLNK EHRPFASFVR FNHHRETVVF GAALLYDETA ETFVWLFQTF 240 LEAMSKKAPK TLFTDQDAAM AKAIPIVMPD TSHRLCTWHL MQNALRHGNC LFQDKGVKGV 300 LNRFMFDIED ENEWEMKWGE MLDTYDAHDN HWLKLIFGVK EKWGWPYVRS TWAAGMSITQ 360 LSESFNAFLK DYICFDFNLN KFFMHFEKVL CEKQYKELEA EYALCQRLPR VRAPFIMLSQ 420 MGNVYTKNIF EEFQDEYFLS VESDIQAIEY IDGCSLYTVV DAIGKNARKV KMEMDGSLAC 480 SCSKFERKGI LCSHCLKVMR EILKLKEIPS QYIMKRWTKQ ARGEAVTDKL GNEIQVDVKF 540 KQASRYKTLM TAFRSIACRA AETEETYDFC CSQLAALGAN VERKISAHFC IEKEARLKKK 600 HPTSKGKRRI KGPCELALQA SFKKKSRAQF LSSSRPVAAP TVRPSPLSIG GDVSIYENVT 660 PLHPPLAPPP PPHSVAMGGT IPLPLIYPTY NANNLAYCGQ PTFMTLLQGG YDIGFEDSQG 720 SQTGSRSTNN LLLHTEGLDS HEELEGTSNF IQRRCL

Sequence ? help Back to Top

Protein Sequence Length: 756 aa Download sequence

MEPDNDCGWK PKVGMTFDSE ESAYDFYNAY GGRMGFSIRR EYCKKNKLTK QIISRNLVCN  60
KEGFRKVDKR DPLTKTPRAE TRTGCEARLF VKLDVNSGKF VVIDFKEKHN HELVSLDCAH  120
MLPSQRKISD TQAIELDLAS ESGLRLGQSF ELMGREAGGR QSLDNEEQIT NMFWADAQMV  180
MDYAQFGDVV TFDTTYKLNK EHRPFASFVR FNHHRETVVF GAALLYDETA ETFVWLFQTF  240
LEAMSKKAPK TLFTDQDAAM AKAIPIVMPD TSHRLCTWHL MQNALRHGNC LFQDKGVKGV  300
LNRFMFDIED ENEWEMKWGE MLDTYDAHDN HWLKLIFGVK EKWGWPYVRS TWAAGMSITQ  360
LSESFNAFLK DYICFDFNLN KFFMHFEKVL CEKQYKELEA EYALCQRLPR VRAPFIMLSQ  420
MGNVYTKNIF EEFQDEYFLS VESDIQAIEY IDGCSLYTVV DAIGKNARKV KMEMDGSLAC  480
SCSKFERKGI LCSHCLKVMR EILKLKEIPS QYIMKRWTKQ ARGEAVTDKL GNEIQVDVKF  540
KQASRYKTLM TAFRSIACRA AETEETYDFC CSQLAALGAN VERKISAHFC IEKEARLKKK  600
HPTSKGKRRI KGPCELALQA SFKKKSRAQF LSSSRPVAAP TVRPSPLSIG GDVSIYENVT  660
PLHPPLAPPP PPHSVAMGGT IPLPLIYPTY NANNLAYCGQ PTFMTLLQGG YDIGFEDSQG  720
SQTGSRSTNN LLLHTEGLDS HEELEGTSNF IQRRCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-98	FAR1 family protein