PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028091252.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 258aa MW: 28102.3 Da PI: 7.834 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 27.7 | 6.7e-09 | 219 | 256 | 3 | 47 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaai 47 +GV++ k+ +W A I++ +k+++lg+ g+ e Aa++++ XP_028091252.1 219 MSGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEAAARLYD 256 68**98..47*********4.....5******************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MELGAGVELA TTAVPHLFLP LACATNLAKN VGAVTSTSTR TPIYKAFPKG ENIGDAAAKG 60 ECVGNVADLG DILEDPAKEP NKDMYMMTIG PEDAPNQPEY VQIGMVLGLP VSVNGKEFSP 120 AYLLSELNEI GGHIIFFLFK NLTMMSFIDC MVDPRTCINV TPCIVQLGKT ISKVSPGSSN 180 ASGSSSSKEQ HNQQYPVPEV KRRKRHRRKH FENQEPCLMS GVYFKNMKWQ AAIKVDKKQI 240 HLGTVGSQEA AARLYDSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.2 | 3e-22 | ERF family protein |