PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028091249.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 275aa MW: 30007.5 Da PI: 7.499 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 28.9 | 2.9e-09 | 219 | 262 | 3 | 53 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 +GV++ k+ +W A I++ +k+++lg+ g+ e Aa++++ ++l XP_028091249.1 219 MSGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEAAARLYDSRELYL 262 68**98..47*********4.....5******************9766665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MELGAGVELA TTAVPHLFLP LACATNLAKN VGAVTSTSTR TPIYKAFPKG ENIGDAAAKG 60 ECVGNVADLG DILEDPAKEP NKDMYMMTIG PEDAPNQPEY VQIGMVLGLP VSVNGKEFSP 120 AYLLSELNEI GGHIIFFLFK NLTMMSFIDC MVDPRTCINV TPCIVQLGKT ISKVSPGSSN 180 ASGSSSSKEQ HNQQYPVPEV KRRKRHRRKH FENQEPCLMS GVYFKNMKWQ AAIKVDKKQI 240 HLGTVGSQEA AARLYDSREL YLHAAGIFAD VNSLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.2 | 4e-22 | ERF family protein |